Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04560 ATGAAGCTTCAGATTAAGGTCGACGACAAAACTGGAAAAATCGTCGATGCTCGATTCAAGACTTTTGGGTGTGGCTCCGCCATCGCTTCTTCCTCTGCTGCAATTCTGGTTAAAAACTCCCTTAAGGATGAAGGGAAAGCAAATGGAGGAAGTTCTGTCCAGAAAAAAAACACTGAAATTGCAAAGCATCTTTCACTTCCACCAGTAAAGCTCCACTGCAACATGCTTGTTGAAGATGCCATTAAAGTGGCTGTTAAAGACTGTGAAGCTAAGCGTGCTAAGGAAACTGCTAGCGGAGAGGCAGCAACAGAAGAGAAGCTAGCCACTGCATGA 333 0.4474 MKLQIKVDDKTGKIVDARFKTFGCGSAIASSSAAILVKNSLKDEGKANGGSSVQKKNTEIAKHLSLPPVKLHCNMLVEDAIKVAVKDCEAKRAKETASGEAATEEKLATA 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04560 110 Gene3D - 1 94 - -
Spst3g04560 110 SUPERFAMILY SufE/NifU 1 92 - -
Spst3g04560 110 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 1 100 IPR002871 GO:0005506|GO:0016226|GO:0051536
Spst3g04560 110 Pfam NifU-like N terminal domain 1 94 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04560 Spst-Chr3 97275479 97276891 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04560 K22068 - gmx:100526856 136.346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04560 3 97275479 97276891 Spst9g02198 9 49105656 49106936 PCT