Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02179 ATGAATTTGTATAGTGGCAGTGTGAATAAAAATTCAGGATCAACAAAAGGGGTGAAGTTTGCTTTGACTTTGGAAGTTCATGATCAAAAACGTTCAGTCATGGGTTCCATTTGCATGTGGCATTTCATTCTACCACTGACTATTGTTGTTGTTGCAACTCTAGGAGACGACACAACAGATTCCTACTGGCTTTTAAGAATTAAATCAGAACTGGTTGATCCATCAGGAGCCCTGAGTAACTGGTCTCCAACTACTCATATTTGTAGCTGGAATGGACTAACATGTGAAGTTGATCAGACACATGTGGTAGGCCTTAATTTGTCTGGCTCGGGAATATCAGGTTCCATTTCAGGTGAGTTCAGTCATCTCATTTCTCTTCAAGCACTTGACTTGTCTTCAAATTCCCTCACAGGCTCCATCCCTTCTGAACTTGGACAGCTTCAAAATCTAAGAATACTGCTTCTGTACTCAAATTATCTCGCTCGCGAAATTCCTATAGAGATAGGTAATTTGAGCAAGTTGCAAGTTCTTAGACTAGGAGATAACATGTTGGCAGGTGAAATCCCTCCTAGCATTGGGAACTTGAGTGAGTTGACAGTGCTAGGTGTAGCCAACTGCAACTTAAATGGAAGCATACCTGCTGAGGTTGGTAACTTGAAGCGTCTTGTGTCTCTTGATTTACAAGTGAACTATCTTAGTGGACTCATACCTGAAGAGATTCAACGCTGTCAAGAGCTCCAGATTTTCGCAGCATCAAACAACATGCTTGAAGGAGAAATACCCTCCTCTATGGGGTCTCTCAAATCATTGAGTATTTTGAACCTGGCCAATAACACTCTATCTGGATCAATTCCTACCTCTTTGAGTCTTCTCTCCAATTTGACATACTTTAATTTGCTTGGAAACAAATTAAATGGTGAAATTCCTTCAGAGCTAAACAGTTTGAGCCAGCTACAGAAGCTTGACTTATCCAGAAACAACCTTTCTGGATCACTAACCCTGCTTAATGTCAAATTACAGAATCTTGAAACTATGGTTCTGTCTGATAATGCTTTAACAGGTATTCCGTATAACTTCTGCCTCAGAGGTTCTAAACTTCAGCAGCTATTCTTGGCTAGGAATAAGCTTTCTGGAAGGTTTCCCTTGGGGCTACTCAACTGCTCCTCAATACAACAGGTGGACCTTTCTGATAACAGTTTTGAAGGTGAACTTCCATCCAGCCTAGACAAACTACAGAACCTCACAGATCTTATGCTCAACAACAACAGCTTCACTGGATCTCTACCTCCAGCGATTGGAAATATTAGTAGCTTGAGAAGCCTTTTCTTGTTCGGTAACTCTTTAACAGGAAAACTCCCAGTGGAGATTGGAAAGCTAAAGAGGTTGAACACCATTTACCTCTATGATAACCAGATGTCTGGACCTATTCCAAGAGAGTTGACAAACTGCACTAGCTTAACTGGAATTGACTTTTTTGGAAACCATTTTTATGGCCCCATTCCAGAGACTATAGGTAAGCTAAAGGACTTAACTGTTCTCCATTTAAGGCAAAATGACCTGTCAGGTCCAATCCCAACAAGCATGGGGTACTGTAAAAGGCTTCAGTTATTGGCATTAGCAGATAACAAGTTGTCAGGTTCCATACCCCCCACGTTCAGTTACCTTTCAAAACTTAGCACCATTACCCTTTACAACAATTCCTTTGAAGGACCACTACCTGATTCCCTCTCTCTTCTCAGAAACCTTAAAATTATAAATTTTTCGAATAACAAGTTCAGTGGAAGTATCTTTCCTCTGACTGGTTCAAATTCTCTCACTGTTTTGGACTTGACAAACAACAGCTTCTCAGGTTCCATTCCTTCTATTCTAGCCAACTCTAGAGATCTCACCCGTCTCAGACTTGCAAACAATTATCTCACAGGAACCATTCCTTCTGAACTTGGCCACCTCACTGAGCTAAACTTCCTTGATTTATCATTCAACAACTTCACAGGACATGTGCCGCCTCAACTCTCCAACTGCAAGAAAATTGAACACCTTCTACTGAAAAATAACAGATTGAGTGGTGAAATGTTGCCGTGGTTAGGAAGCTTTCAAGAACTTGGTGAGCTGGATCTCTCATTCAACAACTTTCATGGAAGAGTTCCTGCTGAGCTTGGTGGCTGCTCAAAGTTGCTTAAGCTTTCTCTCCATCATAATAATCTCTCAGGAGAAATTCCTCTAGAGATTGGCAACCTTACTTCACTCAATGTCTTCAACTTGCAAAGCAATAGTCTCTCTGGCATTATTCCATCAACAATTCAGAAATGCTCTAAGCTGTATGAGCTAAGACTCTCAGAGAACTTCCTCTCAGGTATTATACCAGCTGGACTAGGAGGAGTCACTGAGTTGCAAGTAATATTGGACTTGAGTAGAAACCACTTTTCTGGTGAGATTCCATCATCTCTAGGAAATCTCATGAAGCTAGAAAGACTTGATCTTTCTTTTAACCATCTTCAAGGAAAACTTCCTCCTTCACTTGGTCAACTTACCAGCCTGCATGTGCTAAATCTCTCAAATAACCATCTTCATGGCCTCATTCCTTCAACCTTTTCAGGGTTCCCACTAAGCTCTTTTCTGAATAATGATCACTTGTGTGGCCCTCCACTAGCATCGTGCTCAGAAGCTACGCGAATAGAGCTGTCAGATTCACAAGTAGTAGCAATCATAGTAGCCATTGTCCTTACTTCCACTCTCATATGCCTAGTATTGTTGTATATAATGTTGAGAATCTGGTGCAACTGGATAAAGGTAGCTGTTTCAAGCGAAGATGGTGGTATGGCTGAGCAAAAGACGAGAAATGGAGAGTACTGGAACATAAATTCCCCTGAGCTGTTTCCTTCACCAGATAAACAAATTTCAGCTACAACTTGCATTTGTAATATCAAAATTGATGCAGCAGCCAGGGAAAATACCTTGGTCAGATAA 2967 0.4102 MNLYSGSVNKNSGSTKGVKFALTLEVHDQKRSVMGSICMWHFILPLTIVVVATLGDDTTDSYWLLRIKSELVDPSGALSNWSPTTHICSWNGLTCEVDQTHVVGLNLSGSGISGSISGEFSHLISLQALDLSSNSLTGSIPSELGQLQNLRILLLYSNYLAREIPIEIGNLSKLQVLRLGDNMLAGEIPPSIGNLSELTVLGVANCNLNGSIPAEVGNLKRLVSLDLQVNYLSGLIPEEIQRCQELQIFAASNNMLEGEIPSSMGSLKSLSILNLANNTLSGSIPTSLSLLSNLTYFNLLGNKLNGEIPSELNSLSQLQKLDLSRNNLSGSLTLLNVKLQNLETMVLSDNALTGIPYNFCLRGSKLQQLFLARNKLSGRFPLGLLNCSSIQQVDLSDNSFEGELPSSLDKLQNLTDLMLNNNSFTGSLPPAIGNISSLRSLFLFGNSLTGKLPVEIGKLKRLNTIYLYDNQMSGPIPRELTNCTSLTGIDFFGNHFYGPIPETIGKLKDLTVLHLRQNDLSGPIPTSMGYCKRLQLLALADNKLSGSIPPTFSYLSKLSTITLYNNSFEGPLPDSLSLLRNLKIINFSNNKFSGSIFPLTGSNSLTVLDLTNNSFSGSIPSILANSRDLTRLRLANNYLTGTIPSELGHLTELNFLDLSFNNFTGHVPPQLSNCKKIEHLLLKNNRLSGEMLPWLGSFQELGELDLSFNNFHGRVPAELGGCSKLLKLSLHHNNLSGEIPLEIGNLTSLNVFNLQSNSLSGIIPSTIQKCSKLYELRLSENFLSGIIPAGLGGVTELQVILDLSRNHFSGEIPSSLGNLMKLERLDLSFNHLQGKLPPSLGQLTSLHVLNLSNNHLHGLIPSTFSGFPLSSFLNNDHLCGPPLASCSEATRIELSDSQVVAIIVAIVLTSTLICLVLLYIMLRIWCNWIKVAVSSEDGGMAEQKTRNGEYWNINSPELFPSPDKQISATTCICNIKIDAAARENTLVR 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02179 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 309 404 - -
Spst9g02179 988 Gene3D Ribonuclease Inhibitor 531 890 IPR032675 -
Spst9g02179 988 Gene3D Ribonuclease Inhibitor 58 207 IPR032675 -
Spst9g02179 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 57 213 - -
Spst9g02179 988 SUPERFAMILY L domain-like 59 350 - -
Spst9g02179 988 Gene3D Ribonuclease Inhibitor 335 530 IPR032675 -
Spst9g02179 988 Pfam Leucine rich repeat N-terminal domain 60 95 IPR013210 -
Spst9g02179 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 598 890 - -
Spst9g02179 988 FunFam Uncharacterized protein 214 308 - -
Spst9g02179 988 SUPERFAMILY L domain-like 603 904 - -
Spst9g02179 988 ProSiteProfiles Leucine-rich repeat profile. 845 866 IPR001611 GO:0005515
Spst9g02179 988 Gene3D Ribonuclease Inhibitor 208 333 IPR032675 -
Spst9g02179 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 501 597 - -
Spst9g02179 988 PRINTS Leucine-rich repeat signature 126 139 - -
Spst9g02179 988 PRINTS Leucine-rich repeat signature 315 328 - -
Spst9g02179 988 SUPERFAMILY L domain-like 363 688 - -
Spst9g02179 988 SMART LRR_typ_2 339 362 IPR003591 -
Spst9g02179 988 SMART LRR_typ_2 843 866 IPR003591 -
Spst9g02179 988 SMART LRR_typ_2 819 842 IPR003591 -
Spst9g02179 988 SMART LRR_typ_2 411 435 IPR003591 -
Spst9g02179 988 SMART LRR_typ_2 171 195 IPR003591 -
Spst9g02179 988 SMART LRR_typ_2 650 674 IPR003591 -
Spst9g02179 988 SMART LRR_typ_2 219 242 IPR003591 -
Spst9g02179 988 SMART LRR_typ_2 746 769 IPR003591 -
Spst9g02179 988 SMART LRR_typ_2 315 338 IPR003591 -
Spst9g02179 988 SMART LRR_typ_2 123 147 IPR003591 -
Spst9g02179 988 SMART LRR_typ_2 267 291 IPR003591 -
Spst9g02179 988 SMART LRR_typ_2 698 722 IPR003591 -
Spst9g02179 988 SMART LRR_typ_2 507 531 IPR003591 -
Spst9g02179 988 FunFam Uncharacterized protein 405 500 - -
Spst9g02179 988 PANTHER UNNAMED PRODUCT 46 574 - -
Spst9g02179 988 Pfam Leucine rich repeat 748 808 IPR001611 GO:0005515
Spst9g02179 988 Pfam Leucine rich repeat 604 663 IPR001611 GO:0005515
Spst9g02179 988 Pfam Leucine Rich Repeat 845 867 IPR001611 GO:0005515
Spst9g02179 988 Pfam Leucine Rich Repeat 821 842 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02179 Spst-Chr9 48275731 48279550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02179 73 887 Receptor kinase-like Gene Family AT5G46330 34.223 8.46e-122 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02179 - - gmx:100802757 1607.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02179 9 48275731 48279550 Spst9g02179 9 48275731 48279550 ECH
Spst3g04545 3 97117429 97120341 Spst9g02179 9 48275731 48279550 PCT