Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02167 ATGCTTCTTCTGTTGTTGAATGTGTTGGGGTTCGGAGCGATGCTTCTTTCGACCCTCTTCCTTACAAAAGGGTCCAAACGTCTTAATGTGATTGGATGGATTTCTCTCGTTTTCAACATAAGCATATTCGCTGCTCCTCTCTGCATTATCAGACGTGTGATAAAGACGAAAAGTGTGGAATTCATGCCTTTAAGTTTGTCCTTTTTTTTGACCGTAAATGCTGTCATGTGGTTCTTCTATGGCCTTCTCCTCAACGACTACTACATCGCTCTCCCAAATACGCTAGGTTTTCTATTCGGCATAATTCAGATGGTGATGTATTTGATTTATAGAAACGCCAAGCCAGATGAGCCAATGGAATTGCAGGAACTGAACGATGATGAGATTAATAATGTTGGGAAGAAGAGCACCTCTGACCCGAATCTTGTAACGAGTGGTGCTGTGACTGAGATAACTATTGAGAATCCACATGGAAAAGAAGCAGGACATGGAAACCACAAAAACATTATGGGTTCCCCTAGCAATGTGTGA 531 0.42 MLLLLLNVLGFGAMLLSTLFLTKGSKRLNVIGWISLVFNISIFAAPLCIIRRVIKTKSVEFMPLSLSFFLTVNAVMWFFYGLLLNDYYIALPNTLGFLFGIIQMVMYLIYRNAKPDEPMELQELNDDEINNVGKKSTSDPNLVTSGAVTEITIENPHGKEAGHGNHKNIMGSPSNV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02167 176 Pfam Sugar efflux transporter for intercellular exchange 30 114 IPR004316 GO:0016020
Spst9g02167 176 MobiDBLite consensus disorder prediction 156 176 - -
Spst9g02167 176 FunFam Bidirectional sugar transporter SWEET 27 119 - -
Spst9g02167 176 Gene3D - 25 122 - -
Spst9g02167 176 PANTHER RAG1-ACTIVATING PROTEIN 1 2 126 IPR047664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02167 Spst-Chr9 47707830 47708793 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02167 2 132 Miscellaneous Gene Families AT5G50790 54.074 7.61e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02167 K15382 - gmx:100794434 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02167 9 47707830 47708793 Spst9g02167 9 47707830 47708793 ECH
Spst3g01169 3 15238603 15240493 Spst9g02167 9 47707830 47708793 PCT