Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01169 ATGGCTCACGATGCCCCTATGATTTTTGCTGTTGGAATTCTAGGTAACCTTGTCTCCTTCTGTTGTTTTCTAGCACCAGTGCCAACATTTTATCGAATTTGTAAGAAGAAAACCACCGAAGCTTACCAATCACTTCCTTACGTGGCAGCACTTTTCACTTCAATGCTTTGGATTTTTTATGCTTACATAAAAACAGGAGAAATACTTCTTATCACCATCAACGCATTTGGTTGTTTTATAGAGACAGTTTATCTTGTCATCTATATCACTTATTGTAACAAGAAAGCTAGGTTTTTTACCTTCAAGATGATTTTCTTGTTCAACGTTGGAGTTATTTTCTTGGTTGTTCTTCTTACTCACGTTCTGGCAAAAGAACGAACAGCCCGAATTGAGCTTCTGGGTTGGATTTGTGTAGTTCTTTCTACCAGTGTGTTTGCAGCACCTTTGAGCATCATTAAAGTGGTTATTCGAACCAAAAGTGTGGAGTTCATGCCTATTTCTCTGTCAGTCCTCCTCACAGTGAGTGCAATTATGTGGATGGCATACGGTATTCTCCTAAGGGACATCTATGTAACACTTCCGAACTTTGTGGGTGTCACGTTTGGAACAATTCAGATAGTACTCTATTTGATATACAGAAAGAACAAGCCAGGTAAGGATCAAAAGCTGCCTGAAAACAAAGACAATGTTAGCAATGAAGAAAACGCCAACACAACTGTGAGTGGTGAGAATCAGGGAGCAAACACTGCTGGATTTGTTGACATTGAGATTGGAGAGAAGAAGGAAGAGAAGAAAGTTCAGGAAGCAGAGAAAAAACAGGACCAAGTTGGTAATTCTCGTGACCAAACAGAACACAACAACAACAGCAACAAAACAAGAGAAGCTAGCACTCAACTACAACAACACAAGGAGGGTTGA 918 0.3976 MAHDAPMIFAVGILGNLVSFCCFLAPVPTFYRICKKKTTEAYQSLPYVAALFTSMLWIFYAYIKTGEILLITINAFGCFIETVYLVIYITYCNKKARFFTFKMIFLFNVGVIFLVVLLTHVLAKERTARIELLGWICVVLSTSVFAAPLSIIKVVIRTKSVEFMPISLSVLLTVSAIMWMAYGILLRDIYVTLPNFVGVTFGTIQIVLYLIYRKNKPGKDQKLPENKDNVSNEENANTTVSGENQGANTAGFVDIEIGEKKEEKKVQEAEKKQDQVGNSRDQTEHNNNSNKTREASTQLQQHKEG 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01169 305 MobiDBLite consensus disorder prediction 280 296 - -
Spst3g01169 305 MobiDBLite consensus disorder prediction 255 279 - -
Spst3g01169 305 PANTHER RAG1-ACTIVATING PROTEIN 1 17 243 IPR047664 -
Spst3g01169 305 Pfam Sugar efflux transporter for intercellular exchange 132 216 IPR004316 GO:0016020
Spst3g01169 305 Pfam Sugar efflux transporter for intercellular exchange 10 96 IPR004316 GO:0016020
Spst3g01169 305 MobiDBLite consensus disorder prediction 219 305 - -
Spst3g01169 305 Gene3D - 128 223 - -
Spst3g01169 305 MobiDBLite consensus disorder prediction 230 248 - -
Spst3g01169 305 Gene3D - 9 98 - -
Spst3g01169 305 FunFam Bidirectional sugar transporter SWEET 9 97 - -
Spst3g01169 305 FunFam Bidirectional sugar transporter SWEET 129 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01169 Spst-Chr3 15238603 15240493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01169 9 299 Miscellaneous Gene Families AT5G50800 46.575 7.95e-84 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01169 K15382 - gmx:100801430 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01169 3 15238603 15240493 Spst9g02167 9 47707830 47708793 PCT