Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02138 ATGGCAAGTCAAACCGGTGCCTCTCGAAGGAGTATTTCCTCGACGAAGAAAGCCTCCGAATCAGGAGTGACTCACGCTACTACTCGAAAATCAATTACCTCTTCGCGACCTGTGGTATTATCAGGAGAGCGAACAGTGAAATCATTGCGACTTTCAAAGGCTCTGACGGTGCCTGAAACAACAACCATCTATGAAGCCTGTCGTCGGATGGCAGCCCGCAGAGTGGATGCTCTATTACTAACTGATTCTAATGCTTTACTCTGTGGAATCCTCACGGACAAGGATATAGCAACACGAGTTATTGCCAAAGAGATTAACCTTGAAAACACACCAGTTTCCAAGGTCATGACTAGGAATCCAGTATTTGTCCTTTCTGAAACTCTTGCTGCGGAAGCCCTTCAAAAGATGGTGCAAGGGAAATTCAGACATTTACCTGTGGTGGAGAACGGGGAAGTTTTGGCTTTATTAGACATAGCCAAGTGTTTGCATGATGCCATTGCCCGAATGGAAAGGGCAGCTGAGAAAGGAAAAGCAATTGCAGCAGCTGTTGAAGGAGTGGAAAAACACTGGGGAACAACAGACTCCAATACATCATTCATTGAAACTCTTCGGGAGCAAATATTCAAGCCATCATTGTCTACAATCATTCCCGATAATTCAAAGCTTGTAACAGTATCACCAACAGACTCGGTGCTGACAACAACAAAGAAGATGGTTGAATTTCATGAAAGTTGTGCTGTTGTGACTGTTAATAACAAGCCTCACGGCATCTTTACTTCAAAAGATATCTTGTTGCGGGTGATTGCCCAAAATCTTTCTCCAGAATCAACTCCCATAGAGAAGGTCATGACTCCAAATCCAGAATGTGTAGTAATTGATACGCCCATTGTTGATGCACTTCACACCATGCATGACGGAAAATTTTTGCATCTTCCTGTGATTGATAGAGATGGCAGTGTAGTTGCTGTGGTCGATGTGATTCATGTTACTCATGCTGCTGTGGCGACAGTAAGTCAGGTTGGGAATAATGAAGCTGCAACCACCTTGATGCAAAGATTTTGGGATTCAGCCATGTCCTTAACCCCAAATGATGATGACGATGATACACGAAGTGACAGTTCCTTGAAATTGGCTTCAGAGGGAGGAGAAACGGCGAGGTCCATTCCTCATCTTTCATCAACCATGGCCTACACATTTTCCTTCAAAATACAAGATAGAAAGGGCAGAATGCACAGATTCACATGTGATACCCGGAGCATGAAAGAGGTTATAACTTCAATCATTCAGAGACTTGGTGATGATATTGATCCTAACAACGTACCCCAAATTTTGTATGAAGATGAAGATCATGATAAAGTTATATTGGCTTCAGACAGTGATCTTGCAGCAGCTGTGGATCACGCAAAGACAGCTGGTTTGAAGGGGTTGAAATTGCACTTAGACTTCGGAGGACAACGTGGCGATTTGAAAGGTTCTCGTTCAGGAAGTTATGCTTATTCAGATGCATGGACCTCTGCATATAGTGCTGCGGCAGCTGGAGCTGCACTTGTTGCTGGCTTAGGCATATTAACGTACTTGAAGCGAGTTTGA 1590 0.4377 MASQTGASRRSISSTKKASESGVTHATTRKSITSSRPVVLSGERTVKSLRLSKALTVPETTTIYEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIAKEINLENTPVSKVMTRNPVFVLSETLAAEALQKMVQGKFRHLPVVENGEVLALLDIAKCLHDAIARMERAAEKGKAIAAAVEGVEKHWGTTDSNTSFIETLREQIFKPSLSTIIPDNSKLVTVSPTDSVLTTTKKMVEFHESCAVVTVNNKPHGIFTSKDILLRVIAQNLSPESTPIEKVMTPNPECVVIDTPIVDALHTMHDGKFLHLPVIDRDGSVVAVVDVIHVTHAAVATVSQVGNNEAATTLMQRFWDSAMSLTPNDDDDDTRSDSSLKLASEGGETARSIPHLSSTMAYTFSFKIQDRKGRMHRFTCDTRSMKEVITSIIQRLGDDIDPNNVPQILYEDEDHDKVILASDSDLAAAVDHAKTAGLKGLKLHLDFGGQRGDLKGSRSGSYAYSDAWTSAYSAAAAGAALVAGLGILTYLKRV 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02138 529 Gene3D - 194 345 IPR046342 -
Spst9g02138 529 Gene3D - 21 181 IPR046342 -
Spst9g02138 529 ProSiteProfiles CBS domain profile. 116 174 IPR000644 -
Spst9g02138 529 SMART PB1_new 398 483 IPR000270 GO:0005515
Spst9g02138 529 MobiDBLite consensus disorder prediction 360 384 - -
Spst9g02138 529 CDD PB1_MUG70 399 483 - -
Spst9g02138 529 MobiDBLite consensus disorder prediction 1 39 - -
Spst9g02138 529 SUPERFAMILY CBS-domain pair 221 333 IPR046342 -
Spst9g02138 529 SUPERFAMILY CAD & PB1 domains 390 480 - -
Spst9g02138 529 ProSiteProfiles CBS domain profile. 283 344 IPR000644 -
Spst9g02138 529 Gene3D - 400 480 - -
Spst9g02138 529 Pfam PB1 domain 398 481 IPR000270 GO:0005515
Spst9g02138 529 ProSiteProfiles PB1 domain profile. 396 483 IPR000270 GO:0005515
Spst9g02138 529 Pfam CBS domain 219 265 IPR000644 -
Spst9g02138 529 Pfam CBS domain 112 156 IPR000644 -
Spst9g02138 529 Pfam CBS domain 52 98 IPR000644 -
Spst9g02138 529 Pfam CBS domain 280 329 IPR000644 -
Spst9g02138 529 SMART cbs_1 119 163 IPR000644 -
Spst9g02138 529 SMART cbs_1 286 334 IPR000644 -
Spst9g02138 529 SMART cbs_1 221 268 IPR000644 -
Spst9g02138 529 SMART cbs_1 53 101 IPR000644 -
Spst9g02138 529 SUPERFAMILY CBS-domain pair 43 160 IPR046342 -
Spst9g02138 529 ProSiteProfiles CBS domain profile. 215 275 IPR000644 -
Spst9g02138 529 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 18 469 - -
Spst9g02138 529 ProSiteProfiles CBS domain profile. 50 107 IPR000644 -
Spst9g02138 529 CDD CBS_pair_MUG70_1 51 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02138 Spst-Chr9 45869478 45874218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02138 - - gmx:100785816 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02138 9 45869478 45874218 Spst9g02138 9 45869478 45874218 ECH
Spst9g02138 9 45869478 45874218 Spst3g01135 3 14673534 14679623 PCT