Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02110 ATGGTGACAATGGAAGAGAGTCCACGCAGTCCAGAGGCGAAGGTGGGGTTGCGAGTGGAGGATCTATGGGACGTTCAGGAGCCACAGCTGAGTCCTGATGAGAAGCTCAATGCTTGCTTTGAAAGCATCCCTGTCTCTGCCTTTCCTCTACCTCCTTCAAATCAAGATATTGAGATAAAATCCGATACCACCCTAGCAGAAGCAGTGAAAATGCTTGCACAGCAGAACATTCTCAGTGCACCTGTGGTGGATGTAGATGCACCTGAAGATGCTAGTTGGATTGACAGATATATAGGAATAGTTGAGTTTGCAGGAATTGTTGTATGGATTCTGCATCAGTCTGAACCCACATCTCCTAGGAGTCCATCCAGTGGAACCACTATCGTGGCTGCAGTTAATGGAACTTCTGCTTTCGAACATGAAGCCTCAGGCCTTGAATCTGCCATGACGACTTCAGGCAATTTTTTTGAGGATCTGACTTCATCTCAACTTTATAAGAATACCAAGGTTCGTGACATTTCAGGGTCATTCCGCTGGGCCCCCTTTCTCGCTTTGGAGAGATCAAACTCATTTTTGACCATGCTTTTGCTTCTTTCCAAGTACAAGATGAAGAGTGTTCCTGTGGTGGACTTAGGTGCAGGTCGAATTCACAACATTATTACACAGTCTTCTGTAATTCACATGTTGGCAGAATGCGCTGGTCTTCAGTGGTTTGAGAATTGGGGAACCAAGAAACTGTCTCAAGTTGGACTTCCCATGGTGACACCAAATCATATTATCAAGGTTTATGAAGATGAACCAGTGCTTCAAGCATTTAAACTGATGAGGAAAAAAAGAATTGGGGGGTTGCCAGTGATGGAAAGGGGTGGCAGCAGGGCAATTGGTAACATAAGCCTGCAAGATGTTCAATTTCTCCTAACTGCTCCTGAAATCTACCATGATTATAGATCTATTACAGCAAAAGACTTCCTGACAGCCGTTAAATGCTTCTTAGAGAAGCGTGAAGGGACCTTTCAAGTGTCAGGTGAACTGATTACATGCAGTAAAGATTTCACAATCAAAGAACTGATTCAACTGCTTGACCATGAGAAGATTCATAGGGTCTACGTTGCTGACAATGATGGGAATCTTGAAGGACTGATCACTCTGAGAGATATCATCTCAAGGTTAGTACATGAGCCCCGTGGCTATTTTGGTGATTTCTTTGATGGGGTTCTTCCGATGCCTCCAAACAGCCGGGTTTGA 1245 0.4442 MVTMEESPRSPEAKVGLRVEDLWDVQEPQLSPDEKLNACFESIPVSAFPLPPSNQDIEIKSDTTLAEAVKMLAQQNILSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSEPTSPRSPSSGTTIVAAVNGTSAFEHEASGLESAMTTSGNFFEDLTSSQLYKNTKVRDISGSFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVVDLGAGRIHNIITQSSVIHMLAECAGLQWFENWGTKKLSQVGLPMVTPNHIIKVYEDEPVLQAFKLMRKKRIGGLPVMERGGSRAIGNISLQDVQFLLTAPEIYHDYRSITAKDFLTAVKCFLEKREGTFQVSGELITCSKDFTIKELIQLLDHEKIHRVYVADNDGNLEGLITLRDIISRLVHEPRGYFGDFFDGVLPMPPNSRV 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02110 414 Pfam CBS domain 259 302 IPR000644 -
Spst9g02110 414 Pfam CBS domain 343 391 IPR000644 -
Spst9g02110 414 ProSiteProfiles CBS domain profile. 340 398 IPR000644 -
Spst9g02110 414 SUPERFAMILY CBS-domain pair 30 230 IPR046342 -
Spst9g02110 414 ProSiteProfiles CBS domain profile. 253 315 IPR000644 -
Spst9g02110 414 SMART cbs_1 55 111 IPR000644 -
Spst9g02110 414 SMART cbs_1 258 307 IPR000644 -
Spst9g02110 414 SMART cbs_1 343 391 IPR000644 -
Spst9g02110 414 SMART cbs_1 181 230 IPR000644 -
Spst9g02110 414 CDD CBS_pair_SF 258 387 - -
Spst9g02110 414 Gene3D - 243 393 IPR046342 -
Spst9g02110 414 Gene3D - 37 236 IPR046342 -
Spst9g02110 414 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 47 390 - -
Spst9g02110 414 SUPERFAMILY CBS-domain pair 253 400 IPR046342 -
Spst9g02110 414 ProSiteProfiles CBS domain profile. 52 117 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02110 Spst-Chr9 43390490 43393203 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02110 - - gmx:100780629 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02110 9 43390490 43393203 Spst9g02110 9 43390490 43393203 ECH
Spst3g04433 3 95896421 95899396 Spst9g02110 9 43390490 43393203 PCT