Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02106 ATGCTAACCTGCGCCTATTGTGGGGTGCTGTGCACCGAACTCAGAAGCAGACACGGCATAATGCGAAAACGAAACGAGAAGAAGAACACGAAGCAAGAACGAAGAAGAAGCATGGTTTCAACGAGACGCAACAGTGGATCTTTCTCCAACGGCAACAAGAGGCCTTCTTCTTCAGAAGACAAAACTCCCTCTCCTTCCCCGAAGCGCCAAAAGGTCGACAATGTTGCTCCCGCCTCGGAGAAACCGATGCCGCCGGCGGAAAATTCCAAGGATTTGGGGATGCCGGAGCCCCCGGCTGATCCCGGAGAATGCGAATCTCGGGACGCTCAGATCGCCGGCGCCACCAATCCCGATGGCAAGGACGACCCCACGCCGCCGATCGCCGATGGTTCTACACCGACTGTGGTTGCTGATAAACCTAGGGGTTCGTTCTCTTCTTGGGCTATATATCAAAAGCAAAACCCGAATTTCGAAGCTTCAGTTCCCTGGTGCAGACTCTTGTCACAATCTGCGCAGAATCCGAATGTTTTAATTTGCACAGCCAACTTCACTATTGGGTCTAGTAGGAGTTGCAATTTCCCGTTGAAGGATCAGACTATAAGTGGAAATTTGTGCAGGATCAAGCACACGCAGCGCGAGGGAAGTGCTGTGGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCGGTGGTAGTGAATGGGACGCTCGTCAAGAAGAGTACCAGCTGTGTGCTTAACTCGGGGGACGAGGTGGCTTTTGGTTTGATTGGGAATCATTCATATATTTTTCAGCAAATAAATCCCGAAGTTGCAGTTAAGGCTGCAGAAATTCAGGGTGGCGTCGGCAAGTTTTTCCAGATTGAAAGGAGAGCTGGAGACCCTTCAGCGGTGGCTGGAGCTTCTATTCTGGCTTCTCTTTCTAGCCTCAGACCGGATCTTACGAGATGGAAATCTCCATCTCAGACAGCCAGTAAACCTCAGGAGGGTACGGATGTTCCTAGTCACTCTGTTCTCCCTGATGGTACAGAGACTGAGCTCGATGTGGAAGGCAACTCAGCTCCAAATGTAGCGACAGATAAGGCTGCTGAAGTTGGTGCAAGTGACAAGAATTTGCCTATGGATTGCGATCCAGATGATGCAGGCGCAGAGGCAGGCAATGTAAAATTCTCTGGGGTGAATGCTTTCCTAGGGCCTTTCTTCAGGATTCTAGCTGGATCTACTTGTAAAGTGAAATTGAGCAAAAGTATCTTTAAACAGGTATTCGAAGAAAGACATGGGACGAGGGATGCGCAAGCTGCATCAACTTCGGGTACTTCTGTTCGCAGTGCAGTTTTTAAAGAGGATGTTCATGCTGCAATATTGGATGGGAAAGAAATAGAAGTGTCTTTTGACAATTTCCCTTACTACCTAAGTGAGAATACAAAAAATGTTCTAATTGCAGCTTGCTTTATACACCTGAAGCATAAAGAACATGCAAAGTACACAACAGATCTTACAACCATAAACCCTCGGATTCTACTTTCAGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTGGCAAAAGCACTTGCAAAACACTTTGGAGCTAAATTGCTCATATTTGATAGCCATTCACTTTTGGGTGGTTTAACTTCCAAAGAAGCTGAGCTCCTCAAAGATGGATCTAATGCTAGTGCTAAACAAAGTCTGATAACTGCAGACATGGCTAGGAGCATGGATACACCAACTAGTGAACCAGATACACCTAACTCTTCAAATGCAGCTACTCCATATGGTTTTGAGTCTCAACTTAAGTTGGAAGCTGATAATATACCATCTACCTCTGGAACAGCTAAAAATTGTGTGTTTAAACTAGGTGACAGGGTAAAATACAGTTCATCTTCTGGGGGAATGTATCAGCTTCAGACAATTTCTTCACGGTACAAGTTTGTGTTAAGTTGTTCTGACATTTCTGTTTCACACGATCTCATTGATACAATTGTTATGCACATCCTTTTGCTTTTATCACATTAA 2013 0.459 MLTCAYCGVLCTELRSRHGIMRKRNEKKNTKQERRRSMVSTRRNSGSFSNGNKRPSSSEDKTPSPSPKRQKVDNVAPASEKPMPPAENSKDLGMPEPPADPGECESRDAQIAGATNPDGKDDPTPPIADGSTPTVVADKPRGSFSSWAIYQKQNPNFEASVPWCRLLSQSAQNPNVLICTANFTIGSSRSCNFPLKDQTISGNLCRIKHTQREGSAVAVLESTGSKGSVVVNGTLVKKSTSCVLNSGDEVAFGLIGNHSYIFQQINPEVAVKAAEIQGGVGKFFQIERRAGDPSAVAGASILASLSSLRPDLTRWKSPSQTASKPQEGTDVPSHSVLPDGTETELDVEGNSAPNVATDKAAEVGASDKNLPMDCDPDDAGAEAGNVKFSGVNAFLGPFFRILAGSTCKVKLSKSIFKQVFEERHGTRDAQAASTSGTSVRSAVFKEDVHAAILDGKEIEVSFDNFPYYLSENTKNVLIAACFIHLKHKEHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALAKHFGAKLLIFDSHSLLGGLTSKEAELLKDGSNASAKQSLITADMARSMDTPTSEPDTPNSSNAATPYGFESQLKLEADNIPSTSGTAKNCVFKLGDRVKYSSSSGGMYQLQTISSRYKFVLSCSDISVSHDLIDTIVMHILLLLSH 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02106 670 CDD FHA 183 263 - -
Spst9g02106 670 Pfam FHA domain 184 253 IPR000253 GO:0005515
Spst9g02106 670 Gene3D - 162 270 - -
Spst9g02106 670 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 443 560 - -
Spst9g02106 670 MobiDBLite consensus disorder prediction 313 355 - -
Spst9g02106 670 MobiDBLite consensus disorder prediction 313 330 - -
Spst9g02106 670 MobiDBLite consensus disorder prediction 22 139 - -
Spst9g02106 670 MobiDBLite consensus disorder prediction 41 63 - -
Spst9g02106 670 SUPERFAMILY SMAD/FHA domain 154 262 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02106 Spst-Chr9 43255221 43259894 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02106 - - gmx:100780098 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04436 3 95924722 95929752 Spst9g02106 9 43255221 43259894 PCT