Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04436 ATGGTTTCGACGAGACGCAGTGGATCTCTCTCTGCCAACAACCCCAAAAGATCTTCCTCATCGGAAAATAAACCTCCTTCGCCGAAGCGTCAAAAGGTGGACAATGGCGGTTCGTCGGAGAAACCGGTGCCGACACCGGCGGATAATTCAAAGGATTTACGTACTCCGGAGACTGTGCCTGATCCCGGAGAATGTGGCTCCGGCGATGTTCAGATCGCCGGAACGGGTGCTGTCGATGGAGTGAGCTCCGACAAGGGAGACGCTATGCCTGCTGTACCTGTCACAGCGCCGATTGCTGACGCCGCATGTCCGTCCTTCTCTTCGTGGAGTGTATATCAGAAACAGAATCCGAATATTGAGGGGGGACCATGGTGCAGGTTCTTGTCTCAGTCTGCACAGAATCCTAATGTTGCTGTTTGCATACCCAATTTCACGATTGGTTCTAATAGAAGTTGCAACTTTGCACTGAAGGATCAAACTCTAAGTGGAAATTTATGCAAGATCAAGCACACACAGGGTGACGCGAGTGCTGTAGCTGTGCTAGAAAGTACGGGTAGCAAGGGATCTGTGCTAGTAAATGGGACGCATGTCAAGAAGAATACCTGCTGTGTGCTTAACTCGGGTGATGAAGTGGTTTTTGGTGTTCTTGGAAATCATTCTTATATTTTCCAGCAACTAAATACTGAGGTTGCAATTAGGGGTGCAGAAATTCCAAGTGGTGTTGGGAAATTTCTGCCGCTTGAAAGGAAAAGTGGAGACCCTTCAGCCGTGGCTGGGGCCTCCATTTTGGCTTCTCTTTCCATCAAACAGGACCTTACAAGATGGAAATCTCCAACTCAGCCCTCTAGTAAACCTCCCCAGGGTACTGATGTCTCTAGTCATCCTGTTCATCATGATAGTACAGAAATTGAGCTTGATGGCTCAGAGTCAACTCCAAATGTGCATAGTGATAAAGCAGCTGATGCTGAAACAAATGAGAAGAATTCAACAATGGATTGCAATCCGGAAGCTGGTGCAGAGCCAGGCAATGTAAAACTCTCTGGGGTGAATGATTTCCTAAGGCCTTTCTTCAGGATCTTAGCTCGACCTAGTTGTAAACTGAAATTGAGCAAAAGTATCTGTAAACAGGTATTGGAAGAAAGAAATGGGATGCTGGACATGCAAGCTGCATCAACATTGGGTACATCTGTGCGCTGTGCAGTGTTTAAAGAAGATGTTCATGCTGCTGTACTCGATGGAAAAGAAATAGATGTTTCTTTTGACAACTTCCCTTACTATTTAAGTGAGAGCACAAAAAATGTTTTGGTGGCTGCTTGCTTTATGCACCTAAGGCATAAAGAACATGAAAAGTTTACTGCAGATCTTACAACCATAAACCCTCGTATTCTCCTATCAGGACCTGCAGGGTCTGAAATATATCAGGAAATGTTGGCAAAAGCACTTGCAAAATACTTTGGAGCTAAGCTGCTCATATTTGATAGTCATTTGCTTTTGGGTGAAGCTGAGCTACTCAAAGATGGATTAAATGCTGAAAAATCCTTCTGCAGCACTAGACAAAGTCCTACAGGTACAGGTACAAAAGTGGCTGGGAGCATGGATCCATCAGCTACTGAAATAGAGACACCTAGCTCTTCAAGTGCACCTATATTGGGCTTTGAGTCTCAAACTAAGTTGGAAACTGATACCATGCCATCGACCTCTGGAACAGCTAAAAGTTATGAAATGAGTGGTGAAAAAGTGGAGAAAAACAGTATTGCATATTCACAGGGACCATCTAATGGAAGTCGGGGGAAGGTTGTCTTATTATTTGATGATAATCCCTTGTCTAAAATTGGTGTGAGATTTGATAAACCCATACCAGATGGAGTTGATCTTGGTGGTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTGACTGATCTTCGCTTGGAAAGCAGTGCTGTAGAAGAACTGGACAAATTACTCATTCATTCATTGTTTGAGGTTGCAATTGGCTTGTAG 2004 0.4456 MVSTRRSGSLSANNPKRSSSSENKPPSPKRQKVDNGGSSEKPVPTPADNSKDLRTPETVPDPGECGSGDVQIAGTGAVDGVSSDKGDAMPAVPVTAPIADAACPSFSSWSVYQKQNPNIEGGPWCRFLSQSAQNPNVAVCIPNFTIGSNRSCNFALKDQTLSGNLCKIKHTQGDASAVAVLESTGSKGSVLVNGTHVKKNTCCVLNSGDEVVFGVLGNHSYIFQQLNTEVAIRGAEIPSGVGKFLPLERKSGDPSAVAGASILASLSIKQDLTRWKSPTQPSSKPPQGTDVSSHPVHHDSTEIELDGSESTPNVHSDKAADAETNEKNSTMDCNPEAGAEPGNVKLSGVNDFLRPFFRILARPSCKLKLSKSICKQVLEERNGMLDMQAASTLGTSVRCAVFKEDVHAAVLDGKEIDVSFDNFPYYLSESTKNVLVAACFMHLRHKEHEKFTADLTTINPRILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGEAELLKDGLNAEKSFCSTRQSPTGTGTKVAGSMDPSATEIETPSSSSAPILGFESQTKLETDTMPSTSGTAKSYEMSGEKVEKNSIAYSQGPSNGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGACEGGQGFFCNVTDLRLESSAVEELDKLLIHSLFEVAIGL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04436 667 MobiDBLite consensus disorder prediction 1 85 - -
Spst3g04436 667 MobiDBLite consensus disorder prediction 1 26 - -
Spst3g04436 667 MobiDBLite consensus disorder prediction 516 573 - -
Spst3g04436 667 SUPERFAMILY SMAD/FHA domain 112 224 IPR008984 GO:0005515
Spst3g04436 667 Gene3D - 123 231 - -
Spst3g04436 667 Pfam FHA domain 145 214 IPR000253 GO:0005515
Spst3g04436 667 MobiDBLite consensus disorder prediction 273 294 - -
Spst3g04436 667 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 401 664 - -
Spst3g04436 667 MobiDBLite consensus disorder prediction 516 575 - -
Spst3g04436 667 CDD FHA 144 224 - -
Spst3g04436 667 MobiDBLite consensus disorder prediction 273 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04436 Spst-Chr3 95924722 95929752 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04436 - - gmx:100816731 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04436 3 95924722 95929752 Spst9g02106 9 43255221 43259894 PCT