Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02047 ATGAGCGTGCAGTACCACTACTGCCCTTTCCCAGCGTTGGCTTATGCAACAAAACCCACTCACACACTCCCTATAACTATCGCCAACCACCGTCGCATTCCACCTGACTCTTCCACCTTCTCCGTCATCACCAATCTCTTCTTCCAAAACCCTAATTTCCTTACGGGGAACACTCTCTTCCTTAGGATGCAGAGATTTTGCTCTGTGAGTGGCGTGACTAAGAACAAAGCAATGGTGGAGAGGTTACAGCGCTATGGAGTGATCACATCAAGTAAGGTGGCTGAAGTAATGGAGAGAGTTGATAGAGCGTTGTTTGTACCGGATGGAGCTGCGCCTTATGATGACAGCCCCATGGCCATAGGGTACAATGCCACTATATCTGCCCCACATATGCACGGCATGTGCCTTCAGTTGCTTGAGGAGAATTTGCAGCCTGGGATGCATGCATTGGACGTTGGCTCTGGAACGGGGTACCTAACTGCGTGCTTTGCCTTGATGGTTGGACACCACGGCCGCGCTGTTGGTGTAGAGCATATTCCTGAATTGGTTTCTTTGTCAGCAGAGAATATTCAGAAAAGTGCTGCAGCTACACAATTGAAAGATGGTTCCCTTTCTATTCATGCTGGGGATGGGAGGCAAGGTTGGCCAGAGTTTGCACCTTATGATGCCATTCACGTGGGAGCAGCAGCATCAGAAATTCCTAAACCACTTATTGACCAGTTGAAGCCTGGAGGTAGAATGGTGATTCCTGTTGGAAACATATCTCAAGATTTAAAGGTGGTGGATAAGAATTCTGACGGTTCTATCAGTGTCCGCACTGAGACGTCCGTTCGTTATGTTCCCCTCACAAGTCGAGAAGCTCAACTGCGAGGTTACTAA 879 0.4858 MSVQYHYCPFPALAYATKPTHTLPITIANHRRIPPDSSTFSVITNLFFQNPNFLTGNTLFLRMQRFCSVSGVTKNKAMVERLQRYGVITSSKVAEVMERVDRALFVPDGAAPYDDSPMAIGYNATISAPHMHGMCLQLLEENLQPGMHALDVGSGTGYLTACFALMVGHHGRAVGVEHIPELVSLSAENIQKSAAATQLKDGSLSIHAGDGRQGWPEFAPYDAIHVGAAASEIPKPLIDQLKPGGRMVIPVGNISQDLKVVDKNSDGSISVRTETSVRYVPLTSREAQLRGY 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02047 292 CDD AdoMet_MTases 150 251 - -
Spst9g02047 292 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 75 260 IPR029063 -
Spst9g02047 292 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 71 290 IPR000682 GO:0004719|GO:0036211
Spst9g02047 292 NCBIfam protein-L-isoaspartate O-methyltransferase 74 288 IPR000682 GO:0004719|GO:0036211
Spst9g02047 292 FunFam Protein-L-isoaspartate O-methyltransferase 67 292 - -
Spst9g02047 292 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 209 224 IPR000682 GO:0004719|GO:0036211
Spst9g02047 292 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 74 286 - -
Spst9g02047 292 Gene3D Vaccinia Virus protein VP39 69 292 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02047 Spst-Chr9 41038299 41040436 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02047 K00573 - gmx:100810913 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02047 9 41038299 41040436 Spst9g02047 9 41038299 41040436 ECH
Spst3g04486 3 96443028 96445596 Spst9g02047 9 41038299 41040436 PCT