Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04486 ATGAGTGAAGAGGAAGCGTGTGAAGGAAGAAGCCGAAAGAAAGATGCCATCATGCCAACTACACGGAACTGCAGCACTCCAACTGAACAAGACACCCAACAAACACCAACATACTGGTCTGGGAGTGCCATCAACGAGAACAAAGGAATGGTAGATAATTTGCGGCGTTATGGAATTATTACTTCCATAAAGGTAGGTGAAGTAATGGAAACCATTGATAGAGCTTTGTTTGTACCTGGTGGACTTCAACCTTATGTTGACAGTCCTATGCCGATAGGCTACAATGCTACTATCTCTGCGCCACATATGCATGCCACGTGCCTTCAGTTGCTGGAGGAGAATTTGCAACCTGGGATGCGTGCTCTGGACGTTGGCTCTGGAACGGGATACCTGACAGCATGCTTTGCCTTGATGGTGGGACCCCAAGGCCGTGCTATTGGCGTGGAACATATTCCTGAATTGGTTTCTTTTTCAATTGAGAATATTAAAAAAAGTGCTGCAGCTCAACCATTGAAAGATGGTTCCCTTTCTGTGCACGGTGGAGATGGGAGGGAAGGTTGGCCCGAGTTTGCTCCTTATGATGCCATTCATGTTGGAGCAGCGGCACCAGAAATTCCCCAACCACTTATTGACCAGTTGAAGCCGGGTGGTAGAATGGTCATTCCTGTTGGAAACATATTTCAAGATTTAAAGGTCGTGGATAAGAACTCTGATGGTTCTATCAGTATCCGGACTGAGTCTTCTGTTCGGTATGTGCCTCTCACTAGCAGAGAAGCTCAATTGCGTGGTTAG 792 0.4672 MSEEEACEGRSRKKDAIMPTTRNCSTPTEQDTQQTPTYWSGSAINENKGMVDNLRRYGIITSIKVGEVMETIDRALFVPGGLQPYVDSPMPIGYNATISAPHMHATCLQLLEENLQPGMRALDVGSGTGYLTACFALMVGPQGRAIGVEHIPELVSFSIENIKKSAAAQPLKDGSLSVHGGDGREGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNSDGSISIRTESSVRYVPLTSREAQLRG 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04486 263 Gene3D Vaccinia Virus protein VP39 39 263 IPR029063 -
Spst3g04486 263 MobiDBLite consensus disorder prediction 1 17 - -
Spst3g04486 263 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 47 231 IPR029063 -
Spst3g04486 263 CDD AdoMet_MTases 120 223 - -
Spst3g04486 263 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 39 261 IPR000682 GO:0004719|GO:0036211
Spst3g04486 263 FunFam Protein-L-isoaspartate O-methyltransferase 38 263 - -
Spst3g04486 263 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 46 258 - -
Spst3g04486 263 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 181 196 IPR000682 GO:0004719|GO:0036211
Spst3g04486 263 MobiDBLite consensus disorder prediction 18 41 - -
Spst3g04486 263 NCBIfam protein-L-isoaspartate O-methyltransferase 46 260 IPR000682 GO:0004719|GO:0036211
Spst3g04486 263 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04486 Spst-Chr3 96443028 96445596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04486 K00573 - gmx:100527082 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04486 3 96443028 96445596 Spst3g04486 3 96443028 96445596 ECH
Spst3g04486 3 96443028 96445596 Spst9g02047 9 41038299 41040436 PCT