Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01963 ATGGGCATGCAAAGACGTTCAGAACATAGCAACGATCCAATTTTTGTTGCAGCACACAACACAACAAGACAACACCACAAATGCACACAACCAGACAATGATGGTGTCCCAGAACACACATGTGCACAACAAAACCATTCTCCAAAATTGGCTTCTTTCACTTCCCAAAATGCTCCACCTGTGATACCTGCTTTTGTTGCCTTGCTGCTCCTTGTTACTTCAATTGCCCCAGCATTGTGCCACCCCCAACAGGGTAACCACACTTTTAGGCCACCCCATGAGTTGCTCAAGTTGAGGAGAATCAGAGCTCACTTGAAGAAGATTAACAAGCCTCCTGTCAAGACAATTCAGAGTCCAGATGGTGATTTGATAGATTGTGTTTTATCTCACCAGCAGCCAGCTTTTGACCATCCTAAGCTTAGAGGGCACACACCATTGGATCCACCAGAGAGGCCAAGGGGAAACCACACCGAAGGAGAAAGGGAAAGTGAGAGCTTTCAGCTTTGGAGTGATTCTGGTGAAACATGTCCAGAAGGAACTGTTCCAATCAGAAGAACAACAGAGGAGGATATTCTCAGAGCAAGTTCTATCCGAAGATTTGGAAGAAAACCAAGAGCTGTACGGAGAGACTCATCTGGCAGTGGACATGAGCATGCTGTTGTTTTTGTAAATGGGGATCAATACTATGGAGCAAAGGCAAGCATAAACGTGTGGGCACCAAGTGTAACTGATGAATTTGAATTCAGCTTGTCACAAATGTGGGTTATTGCTGGCTCCTTTGGTAAAGATCTGAACACCATAGAAGCTGGTTGGCAGGTGAGTCCACAACTGTATGGAGACAACTATCCAAGATTTTTCACTTACTGGACAACTGATGCATATCAAACAACTGGGTGCTACAATTTGCTCTGTTCAGGCTTTATCCAAACCAACAATAGGGTAGCAATAGGAGCAGCAATCTCCCCAAGATCTGCTTACAACAGAAGACAGTTTGACATTGGCTTAATGATTTGGAAGGATCCAAAGCATGGACATTGGTGGTTGGAGTTTGGGTCAGGTGTACTGGTAGGGTATTGGGCAGCAAACATGTTCAGCCACTTGAGGAGCCATGCAAGCATGGTGCAATTTGGAGGGGAAATAGTGAACACACGTTCAAGGGGTTACCACACAAGCACCCAAATGGGGAGTGGGCATTTTGCTGAAGAAGGGTTCAGAAAAGCAGCATATTTTAGAAACTTGCAAGTGGTTGATTGGGACAATAGCTTGCTTCCTCTTTCAAACATTCATCACTTGGCTGATCACTCCAATTGCTACAACATAAGGCAAGGGACCAGCAATGTTTGGGGAACTTACTTTTACTATGGAGGGCCTGGAAGGAATGTGAGATGCCCATGA 1395 0.4509 MGMQRRSEHSNDPIFVAAHNTTRQHHKCTQPDNDGVPEHTCAQQNHSPKLASFTSQNAPPVIPAFVALLLLVTSIAPALCHPQQGNHTFRPPHELLKLRRIRAHLKKINKPPVKTIQSPDGDLIDCVLSHQQPAFDHPKLRGHTPLDPPERPRGNHTEGERESESFQLWSDSGETCPEGTVPIRRTTEEDILRASSIRRFGRKPRAVRRDSSGSGHEHAVVFVNGDQYYGAKASINVWAPSVTDEFEFSLSQMWVIAGSFGKDLNTIEAGWQVSPQLYGDNYPRFFTYWTTDAYQTTGCYNLLCSGFIQTNNRVAIGAAISPRSAYNRRQFDIGLMIWKDPKHGHWWLEFGSGVLVGYWAANMFSHLRSHASMVQFGGEIVNTRSRGYHTSTQMGSGHFAEEGFRKAAYFRNLQVVDWDNSLLPLSNIHHLADHSNCYNIRQGTSNVWGTYFYYGGPGRNVRCP 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01963 464 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 99 460 - -
Spst9g01963 464 Gene3D - 240 352 - -
Spst9g01963 464 Pfam Neprosin 247 457 IPR004314 -
Spst9g01963 464 MobiDBLite consensus disorder prediction 136 167 - -
Spst9g01963 464 Pfam Neprosin activation peptide 115 221 IPR025521 -
Spst9g01963 464 MobiDBLite consensus disorder prediction 135 180 - -
Spst9g01963 464 FunFam Putative carboxyl-terminal proteinase 237 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01963 Spst-Chr9 29729513 29733936 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01963 - - gmx:100777828 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04534 3 97046715 97049833 Spst9g01963 9 29729513 29733936 ECH
Spst9g01963 9 29729513 29733936 Spst9g01963 9 29729513 29733936 ECH
Spst3g04534 3 97046715 97049833 Spst9g01963 9 29729513 29733936 PCT