Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04534 ATGGACATGAAGGGATATTCAGTTTCCTGGACAAAACATAAGAAAGAGCCATATTTTGCAGCTCATCACACAAGAAGACAACAACAATGCATACAAGCAAATCATGATGCCCCAGAAGAAACAAGTTCACTAAATCATTCCCTGAAATTGGCTGTTTCCACTACCCAAAATACTCTACTGCCTATGCTACCTGCCTTTGTTGTTTTGCTCCTACTTGTTACTTCAATTAGCACAGCATTCTCTCACCCCATTGCCTCCAATTTAACTTCGCCAGCACACTCTCACCTCAATGCTAACAACACTTTGAGGCCAGCTGCAGTGTTGCAAAAGTTGAGGAGAATCAGAGCTCACCTCAACAAGATTAACAAGTCTCCTGTTAAAACAATTAAGAGTCCAGATGGGGATTTGATAGATTGTGTTTTCTCTCATCAGCAACCTGCTTTTGACCATCCTCTGCTCAAAGGGCAAAGACCATTGGATCCACCGGAGAGGCCAAAGGGCCAACCCAATGGAGAAACAGCCATAGAGAGCTTTCAGCTTTGGTCTGATTCTGGTGAAGTATGTCCTGAAGGAACTGTTCCAATCAGAAGAACAACTGAACAAGATTTTTTACGAGCGAGCTCTATCAGAAGATTTGGAAGAAAAGTACGGAGGGACTCAACTGGCAATGGTCATGAGCACGCAGTTGTTTTTGTAAACGGAGATCAATACTATGGAGCAAAGGCAAGCATAAACGTGTGGACACCCAGCGTAACCGATCCATACGAATTCAGTTTGTCACAGATATGGGTTATTGCTGGATCTTTTGGCAATGATCTGAATACTATAGAAGCTGGATGGCAGGTAAGTCCCGAGCTATATGGAGACAACTATCCTAGGTTCTTCACTTATTGGACAACGGATGCATATCAAGCAACTGGATGCTACAATTTACTATGTTCAGGATTTGTCCAAACTAACAACAGGATAGCAATAGGGGCTGCAATCTCCCCAAGATCCATCTATGATGCCAGACAATTTGATATTGGCTTAATGGTTTGGAAGGACCCAAAGCATGGACATTGGTGGCTGGAATTTGGGCCGGGACTACTTGTTGGGTACTGGCCAGCATACTTGTTTAGTCACTTGAGAAACCATGCTAGCATGGTACAATTTGGAGGGGAAATAGTGAATTCTGGTTCAAGGGGCTACCACACTGGCACTCAAATGGGTAGTGGCCATTTTGCAGAAGAAGGGTTTAGAAAAGCAGCCTACTTTAGAAACTTGCAAGTTGTTGATTGGGACAATAACTTGCTTCCTCTATCAAATATTCACCAATTGGCTGACCATTCCAATTGCTATGACATAAGGGTGGGATCAAACAATGTTTGGGGAACTTACTTTTATTATGGAGGTCCTGGAAGGAACGTGAGATGTCCATGA 1422 0.4318 MDMKGYSVSWTKHKKEPYFAAHHTRRQQQCIQANHDAPEETSSLNHSLKLAVSTTQNTLLPMLPAFVVLLLLVTSISTAFSHPIASNLTSPAHSHLNANNTLRPAAVLQKLRRIRAHLNKINKSPVKTIKSPDGDLIDCVFSHQQPAFDHPLLKGQRPLDPPERPKGQPNGETAIESFQLWSDSGEVCPEGTVPIRRTTEQDFLRASSIRRFGRKVRRDSTGNGHEHAVVFVNGDQYYGAKASINVWTPSVTDPYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPRSIYDARQFDIGLMVWKDPKHGHWWLEFGPGLLVGYWPAYLFSHLRNHASMVQFGGEIVNSGSRGYHTGTQMGSGHFAEEGFRKAAYFRNLQVVDWDNNLLPLSNIHQLADHSNCYDIRVGSNNVWGTYFYYGGPGRNVRCP 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04534 473 Gene3D - 250 359 - -
Spst3g04534 473 Pfam Neprosin 256 466 IPR004314 -
Spst3g04534 473 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 112 469 - -
Spst3g04534 473 MobiDBLite consensus disorder prediction 150 171 - -
Spst3g04534 473 FunFam Putative carboxyl-terminal proteinase 246 365 - -
Spst3g04534 473 Pfam Neprosin activation peptide 128 230 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04534 Spst-Chr3 97046715 97049833 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04534 - - gmx:100782442 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04534 3 97046715 97049833 Spst9g01963 9 29729513 29733936 ECH
Spst3g04534 3 97046715 97049833 Spst3g04534 3 97046715 97049833 ECH
Spst3g04534 3 97046715 97049833 Spst9g01963 9 29729513 29733936 PCT