Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01884 ATGGAACCCGAACATTCTGATAAGAACTTGCTTTTGTTTCTGCCGGACGATGTTTTCGCCGTCGTTTCTCGGTTCCTGTCGCCGAGAGACGTGTGCAATCTGTGTCTGTGCTGCAAGAGTTTGAACGCTCTTGTGGCCTCTGAGAAACTCTGGCTCACACAATGTGACGATTTGGGTATAGTGCCCCACAAGGACCTTGTGGAATGGAGAAAGGGCGTGGCTTCTTACAAGGCCCTTTGTCGTTTTCTGGTGGGTGTGAAACCGTTGATTGGAATATGGGTTCACCAGAATCCTGAGCTTGGGAACGTGGTGTATGTGATGCCTGGTTTTGTTTCTGTTGTTGGGTGCAGGATAATTCCCCAGGAGCTTGGTCCTTTGGGGATGGAAGAGGGTCCCATACTGTGGGCTTCTGTCTTTGAGATTGTTAGCGATTTTGATGGTTCCATGATGTTTTTTCTTCATGGGAGGGAGGAGGAGATGAATTATGTTTATCCAGGCTCGGTCAAGCTTACAGACAAGTCCTGTAATGTACTGTTGCTTGAGGTTGAACCTGGGGAGTGTAGCAACGTTAGTGCTTTGTTGCAGAGTAAGAGCTTTGTGCATCACTCGTGCGTGGAGTCGTCATCGTCCAGGAAGATTTGTAGGTCCAATAGCGATGTTTCTAGTTCACAAAGGATGGTTGAAAATGGTGAAGGGATGGTTAGTTTTGGGAAGTTAGCTTTTAGTGATAGGAGGAAGTTGCTTGAGGTTACTACTAGCCATGTTCGACAAAAGGTTCCGGATAAGATGATTGGGCCGTTGTTTCCTAGGTTGAGGGATGATGAGGAGAATTTTCAGAAGGATTTGGTGCTTTTGTGGGAAAGAAGATCACGCCTTAGTCAAATGTATAAGGTTGGTAGTGGTCACATTGATGAGTATAAGTCGAGTTCTCAAGAGGCAGTTGATCCAACCCAGTTCGAATTGGGTGATGTTAGGGCAAGATTTGACCGTTCAAGGTCTATCTCTAATCCTCTGCCTGAGGAGGATACTAACACTCAATGCATCAAGAGGAAAGGTCTTCGAGGATATTTCTGGAATGGCATTAAACAAATGCTTGGAAGATCAAATTCAATGAATGGCAGTCATTCAGTTTCCAAGAAGCTTATGTCAAGGGGTGAGATTAGGTATGAGCGGCTTCAAGAATTCCTTAGATCGAGTGACACAGTAAGACTAACGTTAAAAGCTTCCACTGTGAAGCTATCTTCTTACCGAGCATGGCCAAATATGCGTGACAGTCGGTTTGCACTTTACAAGTTGCCATTGCGAGTTCCCAGAGATGATCAAGAATATGCTGGCTTATGGGGAGGAACTTTTGGTTGGCCTCCTGGAAAGCCTTCCGAGGACAAGCCTGGAAAGGCTTTGTTCTTTCTTCTGCTCTCTTATGAGGAGTTCCAGGGACAACAGCTTCTCATAGCAACTAAAATTTTAGAAGGCACCCACTATGTTTTGCATCCTAATGGTTCAGCAATGTTTACAGCAAATATCAATGAACCTTCGTCTGAACCCTTTCCCTGGGACACTGATGCAGACTTGGTTCCTGTTAATGTCACCCATGCTTTTGTGGGAGAGGGTATTGCAAGTGGTTATGGGTTCAGATACCCTGGATCAAAGCCTGGTTCCCTCTTTGTTTTACAAAATGGCATCCTTGCTTTCATGTGGAAGGAATCAAGAGTTGTTTTGACCTTGCAAAGACTTAACTTGCAAGAACTTTTGAAGAAGGGTGAAAGGGTACCTTCTCTACCGCCGGTTACCAATTTTTCATATCTGACAAAGTCCTACTCCAATGTGTTTGTTGGCCTCCCCAGTCCTTCCAATTTTTTGTCCTCATCAAGGTTTGCTTAA 1881 0.4498 MEPEHSDKNLLLFLPDDVFAVVSRFLSPRDVCNLCLCCKSLNALVASEKLWLTQCDDLGIVPHKDLVEWRKGVASYKALCRFLVGVKPLIGIWVHQNPELGNVVYVMPGFVSVVGCRIIPQELGPLGMEEGPILWASVFEIVSDFDGSMMFFLHGREEEMNYVYPGSVKLTDKSCNVLLLEVEPGECSNVSALLQSKSFVHHSCVESSSSRKICRSNSDVSSSQRMVENGEGMVSFGKLAFSDRRKLLEVTTSHVRQKVPDKMIGPLFPRLRDDEENFQKDLVLLWERRSRLSQMYKVGSGHIDEYKSSSQEAVDPTQFELGDVRARFDRSRSISNPLPEEDTNTQCIKRKGLRGYFWNGIKQMLGRSNSMNGSHSVSKKLMSRGEIRYERLQEFLRSSDTVRLTLKASTVKLSSYRAWPNMRDSRFALYKLPLRVPRDDQEYAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYEEFQGQQLLIATKILEGTHYVLHPNGSAMFTANINEPSSEPFPWDTDADLVPVNVTHAFVGEGIASGYGFRYPGSKPGSLFVLQNGILAFMWKESRVVLTLQRLNLQELLKKGERVPSLPPVTNFSYLTKSYSNVFVGLPSPSNFLSSSRFA 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01884 626 ProSiteProfiles F-box domain profile. 8 54 IPR001810 GO:0005515
Spst9g01884 626 SMART fbox_2 14 54 IPR001810 GO:0005515
Spst9g01884 626 Pfam F-box domain 14 52 IPR001810 GO:0005515
Spst9g01884 626 Gene3D - 2 81 - -
Spst9g01884 626 PANTHER F-BOX PROTEIN FAMILY-LIKE 4 623 IPR040275 -
Spst9g01884 626 SUPERFAMILY F-box domain 5 65 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01884 Spst-Chr9 25096975 25098855 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01884 - - gsj:114415803 1120.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01285 3 16280726 16282762 Spst9g01884 9 25096975 25098855 PCT