Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01832 ATGCATCCTCCTCCATGGCTTACTCATGCTTCTCGTAACCTCAAGTGTCCTCTGTTGTTGCCACAGACAATCTGTACCTCTCAGAAGAAGTATCGCTGCTTTGGAGCTCATGTAGATGCTTCTTTTAATAATAATCCCTTGAAAAATTACAAACCAGTCAGATGTTCTCCATGGTGGTCTGAAGCACAATCCCTGGTTTCTAACCAATCTCTAAACAAACAGCTGTTCTCAGTAGGATCTTTAGCAACTTCTACAGCTCAAGATGTTTCTGATACAACTCGTTTTGGTGATGATAAGATTGGAGTATTACTGTTAAACCTTGGAGGTCCAGAGACTCTAGAAGATGTGCAGCCCTTTTTGTTTAACCTTTTTGCCGACCCGGATATAATACGACTGCCAAGGATATTTAGTTTTCTTCAAAAGCCATTGGCCCAATTTGTATCTATTGTAAGGGCCCCAAAGAGCAAAGAAGGCTATGCTTCAATAGGTGGTGGCTCTCCTCTTAGACGTATGACTGATGCACAGGCTGAAGAGTTGAGAAAATCTCTTTGGGAAAAGAATGTCCCAGCTAAAGTGTATGTTGGAATGCGTTACTGGCATCCTTTCACTGAAGAAGCTATTGAGCAGATTAAAAGGGATGGAATTACAAAGCTTGTTGTTCTTCCACTTTATCCTCAATTTTCAATATCCACCAGTGGATCAAGTCTACGACTACTGGAGAATATATTCCGAGAGGATGAGTATCTAGTCAACATGCAGCACACAGTAATACCATCATGGTATCAACGTGAAGGATACATAAAGGCCATGGCAAATTTAATTGAGAAAGAGCTGAAGAGTTTTGACTGCCCTAAGGAGGTCAAGATATTCTTCAGTGCACATGGGGTGCCTCTTGCTTATGTGGAAGAGGCTGGTGATCCATACAAGGTTGAAATGGAGGAATGTGTGGATTTGATCATGGAAGAACTCGAGACAAGAAAGATAACTAATACCTACACCCTTGCTTATCAGAGTAGAGTTGGGCCAGTGGAATGGTTAAGACCCTATACAGACGAGACAATAATTGAACTTGGAAAAAAGGGGGTGAAAAGTCTGCTGGCTGTTCCAATTAGCTTTGTCAGTGAGCACATTGAAACTCTAGAAGAAATTGATGTTGAATACAAAGAATTGGCTCTAGAATCTGGTATAGAAAACTGGGGTCGTGTTCCTGCTCTAGGATGTGAACCTACCTTCATTTCTGATTTGGCAGATGCTGTCATTGAGAGTCTCCCATATGTTGGTGCCCTGGCTGCCTCAGACCTTGAAGCTCGACAGTCCCTTGTTCCACTGGGCAGTGTAGAAGAGTTATTGGCAGCATATGATACACAACGGAAGGAGTTGCCACCTCCAGTTATAGTGTGGGAATGGGGTTGGACAAAAAGTGCTGAAACTTGGAATGGAAGAGTAGCAATGCTGGCTATACTTCTTCTTTTGTTTTTTGAAGTCACTACAGACAAGGGTTTGCTACACCAGTTTGGAATATGGCCCTCACTTAGGTGA 1539 0.425 MHPPPWLTHASRNLKCPLLLPQTICTSQKKYRCFGAHVDASFNNNPLKNYKPVRCSPWWSEAQSLVSNQSLNKQLFSVGSLATSTAQDVSDTTRFGDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRIFSFLQKPLAQFVSIVRAPKSKEGYASIGGGSPLRRMTDAQAEELRKSLWEKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLENIFREDEYLVNMQHTVIPSWYQREGYIKAMANLIEKELKSFDCPKEVKIFFSAHGVPLAYVEEAGDPYKVEMEECVDLIMEELETRKITNTYTLAYQSRVGPVEWLRPYTDETIIELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIENWGRVPALGCEPTFISDLADAVIESLPYVGALAASDLEARQSLVPLGSVEELLAAYDTQRKELPPPVIVWEWGWTKSAETWNGRVAMLAILLLLFFEVTTDKGLLHQFGIWPSLR 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01832 512 CDD Ferrochelatase_N 100 262 IPR033659 -
Spst9g01832 512 CDD Ferrochelatase_C 268 406 IPR033644 -
Spst9g01832 512 Pfam Ferrochelatase 99 422 IPR001015 GO:0004325|GO:0006783
Spst9g01832 512 SUPERFAMILY Chlorophyll a-b binding protein 467 508 - -
Spst9g01832 512 ProSitePatterns Ferrochelatase signature. 289 308 IPR019772 GO:0004325|GO:0006783
Spst9g01832 512 SUPERFAMILY Chelatase 98 425 - -
Spst9g01832 512 Gene3D - 261 404 - -
Spst9g01832 512 Hamap Coproporphyrin III ferrochelatase [cpfC]. 98 423 IPR001015 GO:0004325|GO:0006783
Spst9g01832 512 PANTHER FERROCHELATASE 94 449 IPR001015 GO:0004325|GO:0006783
Spst9g01832 512 FunFam Ferrochelatase 99 277 - -
Spst9g01832 512 Gene3D - 99 422 - -
Spst9g01832 512 NCBIfam ferrochelatase 98 423 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01832 Spst-Chr9 22489594 22495039 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01832 K01772 - gmx:100785669 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01832 9 22489594 22495039 Spst9g01832 9 22489594 22495039 ECH
Spst3g01243 3 15921634 15927153 Spst9g01832 9 22489594 22495039 PCT