Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01243 ATGCCTCACTCATGCTTCTCGTTGTTGCCACAGGCAATCCGTACCTCTCAAAAGATGTATCGCTGCTCTGGAGGCCATGTGGTGGAAGCTTCTTCTAACACTAATCCCTTGAAAAGTTATGTAGTGCGCAAAAGTACACCAGGATGGTTAGAAACACAACCTTTGGTTTCTGAGAAGTTACTCTACAGGCGCTTGTTGCCCGTTGAAGCTTTAGTAACTCCAACAGTTCAAGATTTTTCTGATACACCTCTTATTGGCGATGATAAGATTGGAGTGTTATTGTTGAACCTCGGAGGTCCAGAGACTCTTGAAGATGTGCAGCCTTTTTTGTTTAACCTTTTTGCTGACCCAGATATAATACGACTACCAAGGTTATTTAGCTTTCTTCAGAAGCCATTGGCCAAATTTGTATCTGTTTTAAGAGCACCAAAGAGCAAAGAAGGCTATGCTTCTATCGGAGGTGGATCTCCTCTTAGACGTATAACTGATGCACAGGCTGAAGAGTTGAGAAAATCTCTTTGGGAAAAGAATGTTCCAGCCAGAGTGTATGTTGGCATGCGATATTGGCATCCATTCACTGAAGAGGCTATTGAACAGATTAAAAGGGATGGAATAACAAAGCTTGTTGTGCTTCCACTTTATCCACAATTTTCAATTTCAACCAGTGGTTCAAGTCTTCGTCTCTTAGAGAGTATATTCAGAGAGGATGAATATCTAGTCAACATGCAGCACACAGTAATTCCTTCATGGTACCAGCGTGAAGGATACATTAATGCCATGGCAAATTTAATTGAGAAAGAGCTACAAGGTTTTGACTGTCCTGAGAAGGTCATGATATTCTTTAGTGCACATGGGGTGCCTCTTGCTTATGTTGAAGAGGCTGGTGATCCATACAAGGCAGAGATGGAGGAATGTGTTGAGTTAATCATGGAAGAGCTTGAAAAGAGAAAGATAACTAATGGATACACCCTTGCTTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCCTATACAGACGAGACAATAGTTGAACTTGGGAAAAAGGGTGTAAAAAGTCTGCTGGCTGTACCAATTAGCTTTGTCAGCGAGCATATTGAAACTCTAGAAGAAATTGATGTTGAGTACAAAGAATTGGCTCTCAAATCTGGCATAGAAAAATGGGGCCGTGTTCCTGCTCTAGGAACTGAACCCACCTTCATTTCAGATTTGGCCGATGCCGTAATTGAGAGTCTCCCATATGTTGGTGCAATGGCTGTTTCAAACCTTGAAGCTCGACAGTCTTTGGTTCCACTAGGCAGCGTAGAAGAGTTATTGGCAGCATATGACACACAACGTAGGGAGTTGCCACCGCCAGTAATTGTGTGGGAATGGGGATGGACCAAAAGTGCTGAAACTTGGAATGGAAGAGCTGCCATGCTTGCTGTGCTTCTTATGTTGTTTTTAGAAGTCACCACTGGTGAGGGATTTCTGCACCAGTGGGGAATATTGCCCTTGTTTAGGTGA 1509 0.4281 MPHSCFSLLPQAIRTSQKMYRCSGGHVVEASSNTNPLKSYVVRKSTPGWLETQPLVSEKLLYRRLLPVEALVTPTVQDFSDTPLIGDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFSFLQKPLAKFVSVLRAPKSKEGYASIGGGSPLRRITDAQAEELRKSLWEKNVPARVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYINAMANLIEKELQGFDCPEKVMIFFSAHGVPLAYVEEAGDPYKAEMEECVELIMEELEKRKITNGYTLAYQSRVGPVEWLKPYTDETIVELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGTEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDTQRRELPPPVIVWEWGWTKSAETWNGRAAMLAVLLMLFLEVTTGEGFLHQWGILPLFR 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01243 502 CDD Ferrochelatase_N 90 252 IPR033659 -
Spst3g01243 502 PANTHER FERROCHELATASE 87 439 IPR001015 GO:0004325|GO:0006783
Spst3g01243 502 SUPERFAMILY Chelatase 88 419 - -
Spst3g01243 502 SUPERFAMILY Chlorophyll a-b binding protein 457 497 - -
Spst3g01243 502 Gene3D Chlorophyll a/b binding protein domain 427 498 - -
Spst3g01243 502 CDD Ferrochelatase_C 258 396 IPR033644 -
Spst3g01243 502 FunFam Ferrochelatase 89 267 - -
Spst3g01243 502 Hamap Coproporphyrin III ferrochelatase [cpfC]. 88 413 IPR001015 GO:0004325|GO:0006783
Spst3g01243 502 Gene3D - 89 412 - -
Spst3g01243 502 NCBIfam ferrochelatase 88 413 IPR001015 GO:0004325|GO:0006783
Spst3g01243 502 Pfam Ferrochelatase 89 412 IPR001015 GO:0004325|GO:0006783
Spst3g01243 502 ProSitePatterns Ferrochelatase signature. 279 300 IPR019772 GO:0004325|GO:0006783
Spst3g01243 502 Gene3D - 251 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01243 Spst-Chr3 15921634 15927153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01243 K01772 - gmx:100803481 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01243 3 15921634 15927153 Spst3g01243 3 15921634 15927153 ECH
Spst3g01243 3 15921634 15927153 Spst9g01832 9 22489594 22495039 PCT