Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01831 ATGAGAACTTCTACCAATTACTTTTCTTCATCCACTTCTTGGTCTTTTCACTTTGTGGCTCTTTTCTTCGTAACTCTACTAGTTCTTGTTTCTTGCCGGAGTCTTCTTGCTCCCAATTTCTCTACACCTCATGTTTGTCGGAGGGGACAACCAACTTCATCGTTGGATACAGAAAAGAGAAGAGTTTCAATGTTACATAATGAAGGAGAGGCTCCATCGCAAACTGCATTTGCTTCAGATAATCATGGTTCTCGAGAATTTATCAATGAAAGTAACGAAAAGCGTGACACCGAGTTTATGCACAGAGGTACGGATAAAGAGAACCTTAAAATTCAGAAGCACAGCAAGCTAAGAAGAATCGAAGAAAAATTGGCTAAAGCAAGGTATTCCATCAGAGAAGCTAGCAAAATTAGAAATTTGACATCAACCCTCCAAGATCCAGACTATGTTCCTCATGGTCCAATTTACAGAAACGCCAATGCGTTTCATAGGAGTTACTTAGAGATGGAAAAGGTGTTCAAGGCTTTTGTGTATGAAGAAGGGGAGCCACCGCTGTTCCACAATGGTCTAAACAAAGACATATATGCCACTGAGGGAATATTCATAAATGAAATGGAAAAGGGGAGGTACTATCGTACTTATGATCCAGATGAAGCTTTTGTGTATTATTTGCCCTTTAGTGTGGTTATGTTGGTCGAATATGTATACGATCGTGGCTCCAATTATAATCGAGATCCCCTTGGCCTTGTTGTAAAAGACTACATACAGATTATATCTCATAAACATCCCTTCTGGAATCGATCCCTCGGCCATGATCATTTCATTCTCTCTTGCCACGATTGGGGTCCAATTGTATCCAGTTACGTGGATTTCTTGTATAACAATGCCATAAGGGTTCTTTGCAACGCAAATACATCTGAAGGATTCAAGCCTGCAAAGGATGTGTCGTTTCCTGAGATTAAACTTATGACCGGGGAACTCACAGGTCTAGTAGGAGGGTATCCCCCATCTCAAAGGACCATCCTTGCTTTCTTCGCAGGTCATCTGCATGGCTATATAAGATACTTGCTTCTACATACATGGAAAAACAAAGACCAAGACGTGCAAGTCTATGAGGAAATTCCTGAAGGAATCTCTTACTACGCAAAGCTTAGAAGCAGCAGGTTTTGCCTCTGCCCAAGTGGTTATGAAGTAGCTAGTCCCAGAATAGTGGAAGCAATATTTGCAGAATGTGTGCCAGTATTGATTTCTGAGAACTATGTTCCACCCTTCGATGATGTTTTGAATTGGAAATCATTTTCAGTTCAAGTGGCTGTCAAGGAAATTCCCAACATCAAAAAGATACTCACGGGCATTTCAGATAGGCAGTACTCGAGGATGCAAAGGAGGGTGAAACAAGTGCAAAGGCATTTTGTGCCTAATGAGCCCCCACAGAGGTATGATATGTTCCATATGACTGTCCATTCCATTTGGCTCAAGAGGTTAAAAATCCATATTCAAGATCAGTAA 1509 0.4102 MRTSTNYFSSSTSWSFHFVALFFVTLLVLVSCRSLLAPNFSTPHVCRRGQPTSSLDTEKRRVSMLHNEGEAPSQTAFASDNHGSREFINESNEKRDTEFMHRGTDKENLKIQKHSKLRRIEEKLAKARYSIREASKIRNLTSTLQDPDYVPHGPIYRNANAFHRSYLEMEKVFKAFVYEEGEPPLFHNGLNKDIYATEGIFINEMEKGRYYRTYDPDEAFVYYLPFSVVMLVEYVYDRGSNYNRDPLGLVVKDYIQIISHKHPFWNRSLGHDHFILSCHDWGPIVSSYVDFLYNNAIRVLCNANTSEGFKPAKDVSFPEIKLMTGELTGLVGGYPPSQRTILAFFAGHLHGYIRYLLLHTWKNKDQDVQVYEEIPEGISYYAKLRSSRFCLCPSGYEVASPRIVEAIFAECVPVLISENYVPPFDDVLNWKSFSVQVAVKEIPNIKKILTGISDRQYSRMQRRVKQVQRHFVPNEPPQRYDMFHMTVHSIWLKRLKIHIQDQ 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01831 502 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Spst9g01831 502 Coils Coil 117 137 - -
Spst9g01831 502 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 29 490 IPR004263 GO:0006486|GO:0016757
Spst9g01831 502 Pfam Exostosin family 171 450 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01831 Spst-Chr9 22484975 22487243 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01831 - - gmx:112997610 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01831 9 22484975 22487243 Spst9g01831 9 22484975 22487243 ECH
Spst3g01212 3 15674458 15677652 Spst9g01831 9 22484975 22487243 PCT