Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01212 ATGTTCAAATCTTTCCAGCTTCATCACCGTCACATCCCTTTTCGCATCCTGCTATCCAAAATCATTTCCTTTCTGGGGGCGCAAAAATGGGTATGTGGAAATTGGGGTTTATTTGTGCCTATTTTCTCTTTACAATTGGCGCTGTGGAGCTGGGCAGGAACCAACCAACTGAAAGAATTTCAGGTTTTTTATTTTGCTGATTTTGGTAGTGCTGGTGATGTATTGGAAGATGATCCAGTGGGAAGGTTGAAGGTTTTTGTATATGAACTTCCAAGTAAATATAATAAGAAAATTCTGCAAAAAGATCCGAGATGCCTCAACCATATGTTTGCTGCTGAAATCTTTATGCACCGGTTTCTCTTATCTAGCCCTGTCCGAACCCTTAATCCTGAAGAAGCTGACTGGTTTTATACTCCGGTATACACCACTTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTTAAGTCACCACGAATGATGAGAAGTGCCATACAGCTTATTTCATCAAACTGGCCGTATTGGAACAGGACAGAGGGGGCAGATCACTTCTTTGTGGTTCCTCATGACTTTGGGGCATGTTTTCATTACCAGGAAGAGAAGGCAATTGAAAGGGGGATTCTTCAACTGCTACGGCGTGCTACATTGGTTCAAACATTTGGACAGAGAAATCATGTATGCTTGAAAGAGGGCTCAATTACCATTCCTCCATACGCTCCACCACAGAAAATGCATACCCACCTAATCCCTGATAAGACTCCCAGGTCCATTTTTGTATCCTTCCGAGGACTTTTCTATGATGTTGGCAATGACCCTGAAGGTGGTTACTATGCAAGAGGTGCAAGAGCAGCAGTGTGGGAGAACTTTAAGGACAATCCTCTTTTTGACATCTCCACTGAGCATCCAACCACGTACTATGAGGACATGCAACGAGCCGTGTTTTGCCTATGCCCACTTGGATGGGCTCCTTGGAGCCCAAGATTGGTAGAGGCTGTGATATTTGGTTGCATACCTGTGATTATTGCAGATGACATTGTGTTGCCATTTGCTGATGCAATCCCATGGGAAGAGATAGGAGTGTTTGTTGCTGAAGAGGAGGTTCCAAAGTTGGATACCATACTCACATCTATCTCACCAGAAGTCATACTAAGGAAGCAAAGATTGCTTGCTAACCCTTCCATGAAGCAAGCAATGCTTTTCCCACAGCCTGCTCAACCTGGAGATGCGTTCCATCAAGTTTTAAATGGACTGGCGCGGAAGCTGCCACATGACAACACTGTGTTCTTGAAACCAGGGGAGAAGATCTTGAATTGGACTGCTGGACCTGTAGGTGACCTTAAACCTTGGTAA 1350 0.4444 MFKSFQLHHRHIPFRILLSKIISFLGAQKWVCGNWGLFVPIFSLQLALWSWAGTNQLKEFQVFYFADFGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILQLLRRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPDKTPRSIFVSFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEEVPKLDTILTSISPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDNTVFLKPGEKILNWTAGPVGDLKPW 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01212 449 Pfam Exostosin family 82 377 IPR040911 -
Spst3g01212 449 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 80 416 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01212 Spst-Chr3 15674458 15677652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01212 K20870 - gmx:100812747 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01212 3 15674458 15677652 Spst3g01212 3 15674458 15677652 ECH
Spst3g01212 3 15674458 15677652 Spst9g01831 9 22484975 22487243 PCT
Spst9g01786 9 20228850 20232222 Spst3g01212 3 15674458 15677652 PCT