Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01805 ATGAGTTCGAAAAGAGGGGGTGGGAGACCCAAAACCATGGTTAACAAGGATATGTCCAAAGGGAAAAGCATATCCGAATCTCAGCCAAGCATTGATCAGTTAACTCAGGGTATTGTTGACACCAAGCTAAACTCAGGAGAAGATGATGGTGATTGGGAGGTATATGCAAAGAAATCCAAGAACAGAGCTGGAAGCAGTGCTGGAAAAGCATGGGGGGGGCCAGCCCATAATTCTAATCCTAGGGCCTGGGGGAATGCAGATATGACTCAAAAGCCAGGCATGTGGAGTCATGGTGGAGTTGGAAGATCTTCTGGAAATTCCTGGCAGACACAAAATGCTAACTCTAGGAGACCAGCTGGCAGAGGAAATGGAAGACCTCAGTTGGCAACAAGTGAAAGCAATTATGTGCCTCCAAATCCTTTAATTCGGCCTCCACTTGAGCATGGCTGGAACTGGCAATCTAGACCTGGTGCAATACAGCCCAATGTAAGGGATGAAATTGCACCTGAGGACCTTGAACAGAATAATGATGATGATGATGATGATAATGATGGGGAGGAGGAGGACTCTGATGCTGTGGAAGATACTGATGATGATCTAATGAGTGATGACTATGATTCAGATGTCAGTCAAAAGAGCCATGACACACGCAAAAAGAACAAATGGTTTAGGAAGTTCTTTGCGAATTTGGATGACTTGACTGTTGAACAGATAAATGAACCAGAAAGACAGTGGCATTGTCCAGCTTGTCAAGGTGGTCCTGGAGCTATTGATTGGTACAGAGGACTGCAGCCCTTGCTGACTCATGCCAAAACAAAGGGATCAAAAAGGGTGAAGATTCACAGAGAGCTTGCTGTACTTTTGGATGAGGAATTACGCAGAAGGGGTACCTCTGTAATTCCAGCAGGGGAGACATTTGGAAAATGGAAGGGTTTGATAGAAGAGGAAAAGGATCATGAAATAGTTTGGCCTCCTATGGTTATCATTCAGAATACTAAGCTTGAACAAGATGAAAATGATAAGTGGATAGGTATGGGTAACCAGGAACTTCTTGATTATTTTAGCGCATATGCTGCTGCAAAAGCACGGCACTCATATGGCCCACAGGGTCATCGTGGGATGAGTGTTTTGATATTTGAAGCCTCAGCCAGTGGCTATCTAGAGGCAGAGCGTCTCCACAAACATTTTGTAGAGCAAGGAACTGATAAAGATTCTTGGTTCAATCGCCCTACTTTATATCTCCCTGGGGGGAATCGCCAGCTTTATGGATACATGGCTACAAAAGAAGATCTTGATTTTTTCAATAGGCATAGTCAAGGTAAATCTAGGCTCAAGTATGACATGAGGTCATATCAGGAGATGGTTGTACACCAAATTCGCCAAATGAGTGAAGACAACCAATACCTTATCTATTTTAAGAACAAGGCTGTGAAAAAAGCTAAACACACGAAAGCTCTAGAAGAATCAATTGGTATAATGTCTGAGAAGCTGCGGAAGACAATGGAGGAAAATCGCATTGTAAGGAGGAGAACTAAAATGCAACACGAAGAGACCAAAGAAGAGATGTATATGCAAGAGCAATTCTTCAAGGACCAGATCAAAATCATTCATGATTCAAGGGATGCAAAGGAAGAAGATTTTGAGAGGATACAACAGGAGGAACGGGAGAAAGTGAAACAGTCAAGTACTACTGGTCATGTAAATACTGAGGAATATAGACTCAAGGTGGATGAATATCTAAAATTTGTTGAGGTCCAAGATAAAGAGATGGAGAATTTTGTTGCTGAAAAGGAGAAACTGTTGCATGCTCATGAAGTGGGTTATGCTGCAATGAAGCGGCAGCATTGGGAGGAGGAGGTGCAGCATGAGCAGAAGTTTGATGAGGAACTAGCCAAGCTCATGGAAAAGTACTCCCCTTCTGAGTCAAAGTCCAATGGTTTCTAA 1944 0.4306 MSSKRGGGRPKTMVNKDMSKGKSISESQPSIDQLTQGIVDTKLNSGEDDGDWEVYAKKSKNRAGSSAGKAWGGPAHNSNPRAWGNADMTQKPGMWSHGGVGRSSGNSWQTQNANSRRPAGRGNGRPQLATSESNYVPPNPLIRPPLEHGWNWQSRPGAIQPNVRDEIAPEDLEQNNDDDDDDNDGEEEDSDAVEDTDDDLMSDDYDSDVSQKSHDTRKKNKWFRKFFANLDDLTVEQINEPERQWHCPACQGGPGAIDWYRGLQPLLTHAKTKGSKRVKIHRELAVLLDEELRRRGTSVIPAGETFGKWKGLIEEEKDHEIVWPPMVIIQNTKLEQDENDKWIGMGNQELLDYFSAYAAAKARHSYGPQGHRGMSVLIFEASASGYLEAERLHKHFVEQGTDKDSWFNRPTLYLPGGNRQLYGYMATKEDLDFFNRHSQGKSRLKYDMRSYQEMVVHQIRQMSEDNQYLIYFKNKAVKKAKHTKALEESIGIMSEKLRKTMEENRIVRRRTKMQHEETKEEMYMQEQFFKDQIKIIHDSRDAKEEDFERIQQEEREKVKQSSTTGHVNTEEYRLKVDEYLKFVEVQDKEMENFVAEKEKLLHAHEVGYAAMKRQHWEEEVQHEQKFDEELAKLMEKYSPSESKSNGF 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01805 647 MobiDBLite consensus disorder prediction 171 204 - -
Spst9g01805 647 MobiDBLite consensus disorder prediction 100 118 - -
Spst9g01805 647 MobiDBLite consensus disorder prediction 171 214 - -
Spst9g01805 647 Pfam XS zinc finger domain 247 285 IPR005381 GO:0031047
Spst9g01805 647 MobiDBLite consensus disorder prediction 18 42 - -
Spst9g01805 647 Pfam XS domain 318 431 IPR005380 GO:0031047
Spst9g01805 647 CDD RRM_like_XS 321 431 IPR005380 GO:0031047
Spst9g01805 647 Gene3D XS domain 313 491 IPR038588 -
Spst9g01805 647 MobiDBLite consensus disorder prediction 1 157 - -
Spst9g01805 647 PANTHER PROTEIN SUPPRESSOR OF GENE SILENCING 3 14 644 IPR044287 GO:0031047|GO:0051607
Spst9g01805 647 MobiDBLite consensus disorder prediction 44 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01805 Spst-Chr9 21533248 21536570 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01805 - - gmx:100804352 1137.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01231 3 15821758 15823293 Spst9g01805 9 21533248 21536570 PCT