Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01231 ATGTCGGCGGCTAAATGGTCGGATAACTTCAGAAGACCATGGCTAGGTATGGGTAATCAAGAACTTCTTAATTATTTTAGCACCTACAATGCTGTGAAAGCTCGACATTCTTATGGCCCCCAGGGTCATCGAGGGTTGAGTGTTTTGATATTTGAAGCCTCAGCTATAGGTTATCTTGGGGCTGAGCGTCTCCACAAGCACTTTGCAGCACAAGGAACTGACAGAGATGCTTGGTTCAGCCACTACCGTAGATTATTTCTTCCTGGTGGCCGAAGACAGCTCTATGGATACATGGCAGGAAAAGAAGACCTGGACTTTTTCAACAGACACTGCCAAGGTAAATCTAGACTCAAATATGACATGAGATCATACCAGGAGATGGTTGTAAACCAACTTCGGCAAATGCATGAGGACAACCAGCTACTTAGTTATTTGCAGGACAGGGATGTTAAAAAACAAAAACAAACAAAAGCTCTTGAAGAATCTCTGGGTATGGTAACTGAGAAGCTGCGAAGGACAAGAGAGGAAAATCGCATTGTGAGGTTGAGAACTAAAATGCAACACGAAGAGAACAAGGAAGAGATGTACATGCAAGAACAATTTTTCAAGGACCAGATCAGAATCATCCATGATTCAAGGGCTGCAAAAGAAGAAGAGTTTGAGAGGATACAGCAGGATAAACGTGAGAAGGTGAAGCCATCAAGTTCTAGCCCTCTAAATGAAGAGGAAGAGAGAGTCAAGGTGGACATATATCTAGAATTTGTTGAGTTTCAAGATAAAGAAATGGAAAACTTTGTTGCTGAAGTGGAGAAGCTCCGTGAAGCACATAAAGACAATGTTGCTACAATGACGCGGAGGCACTGGGAGGAAAAGGTGCAGTTAGAAGAAAGTTTTAACGATGAGCTAGCCAAGCTCATGGAAAAGTACTCCCTATCTCATCCAGAAACCAAGTTTAATGGTAGCTGA 966 0.4265 MSAAKWSDNFRRPWLGMGNQELLNYFSTYNAVKARHSYGPQGHRGLSVLIFEASAIGYLGAERLHKHFAAQGTDRDAWFSHYRRLFLPGGRRQLYGYMAGKEDLDFFNRHCQGKSRLKYDMRSYQEMVVNQLRQMHEDNQLLSYLQDRDVKKQKQTKALEESLGMVTEKLRRTREENRIVRLRTKMQHEENKEEMYMQEQFFKDQIRIIHDSRAAKEEEFERIQQDKREKVKPSSSSPLNEEEERVKVDIYLEFVEFQDKEMENFVAEVEKLREAHKDNVATMTRRHWEEKVQLEESFNDELAKLMEKYSLSHPETKFNGS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01231 321 Coils Coil 255 286 - -
Spst3g01231 321 Coils Coil 172 199 - -
Spst3g01231 321 Gene3D XS domain 3 164 IPR038588 -
Spst3g01231 321 Pfam XS domain 12 104 IPR005380 GO:0031047
Spst3g01231 321 PANTHER PROTEIN SUPPRESSOR OF GENE SILENCING 3 13 315 IPR044287 GO:0031047|GO:0051607
Spst3g01231 321 MobiDBLite consensus disorder prediction 220 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01231 Spst-Chr3 15821758 15823293 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01231 - - gmx:100807738 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01231 3 15821758 15823293 Spst3g01231 3 15821758 15823293 ECH
Spst3g01231 3 15821758 15823293 Spst9g01805 9 21533248 21536570 PCT