Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01784 ATGGAGGGTGTTGTGAGCCCTGAACCACCTCAGAGCTCACCGTTGGATTCCAGTTCCAAGCACGACACAACCAATGATGAACTCAAGGACAGCACTGATGCAGAACTCACCAAAATTCGTCTCATGAGAGCCTTTGTTGAAGCCCAAGATCCCTCTTCCAAGGAAGTGGATGATTTGATGATTAGAAGATTCTTGCGGGCTCGTAGTTTAGATGTGGAGAAGGCTTCGGCGATGTTTCTGAAGTACTTGAAATGGAAACGTTCAATTATTCCAAATGGTTATATATCACCATCAGAGATTGCTGAAGATATTGCACAGGAGAAGCTGTTTGTGCAAGGAGTCGACAAGAAGGGTCGACCTATAATTGTTGCCTTTGCTGCAAAACATTTTCAAAGCAAAAATGGTGCCGATGGATTCAAACGGTATGTAGCCTTTGCTCTGGAGAAGCTGTGTTCAAGGATGCCACCGGGGCAAGAAAAGTTTCTTGGCATTGCAGATATTAAAGGATGGGGATATGCAAACAGTGATCTTCGTGGATACCTTAATTCTCTATCCATTTTGCAGGATTGCTACCCAGAAAGATTGGGAAAGTTGTTTATTGTACACGCACCTTATATGTTTATGAAAATTTGGAAAATGATTTACCCTTTCATTGACGACAACACCAAGAAAAAGATAGTATTCGTGGAGAACAAAAAGCTGAAACCAACATTGCTAGAAGAGATAGAAGAGAGTCAACTCCCAGATATATACGGAGGCCAAATGCCATTAGTGCCTATCCAGGATAGCTGA 792 0.4242 MEGVVSPEPPQSSPLDSSSKHDTTNDELKDSTDAELTKIRLMRAFVEAQDPSSKEVDDLMIRRFLRARSLDVEKASAMFLKYLKWKRSIIPNGYISPSEIAEDIAQEKLFVQGVDKKGRPIIVAFAAKHFQSKNGADGFKRYVAFALEKLCSRMPPGQEKFLGIADIKGWGYANSDLRGYLNSLSILQDCYPERLGKLFIVHAPYMFMKIWKMIYPFIDDNTKKKIVFVENKKLKPTLLEEIEESQLPDIYGGQMPLVPIQDS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01784 263 Gene3D - 5 262 IPR036865 -
Spst9g01784 263 CDD SEC14 110 254 IPR001251 -
Spst9g01784 263 SUPERFAMILY CRAL/TRIO N-terminal domain 20 89 IPR036273 -
Spst9g01784 263 Pfam CRAL/TRIO domain 108 253 IPR001251 -
Spst9g01784 263 SUPERFAMILY CRAL/TRIO domain 99 256 IPR036865 -
Spst9g01784 263 SMART sec14_4 103 256 IPR001251 -
Spst9g01784 263 MobiDBLite consensus disorder prediction 1 32 - -
Spst9g01784 263 PANTHER OS03G0850700 PROTEIN 27 262 - -
Spst9g01784 263 SMART CRAL_TRIO_N_2 57 82 IPR011074 -
Spst9g01784 263 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 97 259 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01784 Spst-Chr9 20162075 20169056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01784 63 226 Acyl Lipid Metabolism Gene Families AT5G47730 27.072 2.80e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01784 - - gmx:100797666 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01784 9 20162075 20169056 Spst9g01784 9 20162075 20169056 ECH
Spst3g01211 3 15649146 15657845 Spst9g01784 9 20162075 20169056 PCT