Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01211 ATGGAAGCCATGAACATGAGGACCAGAGAAGAAGTTACAGGGCAAGTGGGTGTAGAAGATGATGACCTAGTCAAAGGTAGCACTAAGACTGAACTCACCAAAATTCGTCTCCTTAGGACCATTGTTGAATCACGTGATCCTTCTTCTAAGGAAGAAGATGATTTTACGTTAAGAAGATTCCTACGTGCTCGTGATTTAGATTTGGAGAAAGCTTCTACGATGTTCCTGAATTACTTGAAATGGAAACATTCATTTGTTCCAATTGGTGTATCGGCATCAGATGTTCCTAATGAACTTGCTCAAGAAAAGGTGTTCATGCAAGGACGTGACAAGATAGGTCGACCGATAGCTGTTGTCATCGGTAGAAAACATTTTCAGATGAAAGATGGTCTAGATGAATTCAAACGGTTTGTGGTCTATGTCTTTGATAAAATATGTGCAAGGATGCCACCTGGGCAAGAAAAGTTTGTTGCTATAGCTGAACTTAAGGGATGGGGATACTCAAACAGTGACATTCGTGGTTACCTTGGTGCTCTTACAATTTTGCAGGATTACTACCCTGAAAGATTGGGGAAGTTGTTTATTGTCAATGCACCATACATTTTTATGAAAGTGTGGCAAATTATTTACCCCTTCATTGACAACAGAACCAAGAAGAAGATAGTATTTGTGGAAAAAAAGAAGGTGAAATCAACACTTGTTGAAGACATAGATGAAAGTCAGTTAACAGATGTATTCGGCATCCCAAGGAGCGAAGCAGCTCAAAGGATTGGCAATTCAGCTCAGTCTGGTCTGAGGAGATGGGCTAGGCTACTCGCCCCATACATAGGAAGAGGGGGAAGTCAAGTACCTAGATCCAAGATCACGATATCCGGTTTGGTGTGGTTCTCCTATTCTATCTATGGTCTTGCTGCTGAGAGAGAGAGTAAGAATAGAAAGCAGAAGCTCGCCCGAGAGAAAGACAAAGGATGA 972 0.4156 MEAMNMRTREEVTGQVGVEDDDLVKGSTKTELTKIRLLRTIVESRDPSSKEEDDFTLRRFLRARDLDLEKASTMFLNYLKWKHSFVPIGVSASDVPNELAQEKVFMQGRDKIGRPIAVVIGRKHFQMKDGLDEFKRFVVYVFDKICARMPPGQEKFVAIAELKGWGYSNSDIRGYLGALTILQDYYPERLGKLFIVNAPYIFMKVWQIIYPFIDNRTKKKIVFVEKKKVKSTLVEDIDESQLTDVFGIPRSEAAQRIGNSAQSGLRRWARLLAPYIGRGGSQVPRSKITISGLVWFSYSIYGLAAERESKNRKQKLAREKDKG 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01211 323 SMART sec14_4 98 251 IPR001251 -
Spst3g01211 323 Gene3D - 6 278 IPR036865 -
Spst3g01211 323 Pfam CRAL/TRIO domain 102 247 IPR001251 -
Spst3g01211 323 SUPERFAMILY CRAL/TRIO N-terminal domain 26 85 IPR036273 -
Spst3g01211 323 CDD SEC14 104 247 IPR001251 -
Spst3g01211 323 PANTHER OS03G0850700 PROTEIN 27 247 - -
Spst3g01211 323 SMART CRAL_TRIO_N_2 53 78 IPR011074 -
Spst3g01211 323 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 92 254 IPR001251 -
Spst3g01211 323 SUPERFAMILY CRAL/TRIO domain 95 247 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01211 Spst-Chr3 15649146 15657845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01211 56 221 Acyl Lipid Metabolism Gene Families AT5G47730 28.415 2.14e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01211 - - gmx:548015 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01211 3 15649146 15657845 Spst3g01211 3 15649146 15657845 ECH
Spst3g01211 3 15649146 15657845 Spst9g01784 9 20162075 20169056 PCT