Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01780 ATGGACTTGCTTGTGGCTAATTTTGTCGGGCTAGAGGCTAAGCTTGCAGGCTTAACCAAGGTCGGTCAATATGTAAAGACAGTACTGGGCCCTCAGTTTACTTTGAGGAACCATTTGTGGGTTCCCCAAAATTCTAACCTTCTCAGGCCCTTTTCAGACTCAACAGCTGCTTCGAATGGAAATCCGCGCCTTCCTGATTCTTTGCATTTTATTGATCCTTCAGGACGGCCAAATGCATACCAGAGGGCAATTGTCGAGGTTGGGGAAGTGTTACAGTTTTATGATTCAGACAAACGATTTCCTACTTGGGGATTTGGGGCACGACCAATTGATGGTCCTGTTTCCCATTGCTTCAACTTGAATGGAAGTAGTCATTATTGTGAGGTGGAGGGGATCCAAGGAATTATGATGGCTTACACAAGTGCCCTGCATAATGTATCTCTTGCAGGACCTACTCTTTTTGGACCTGTCATAAGCACAGCTGCACTGATTGCCAGCCAATCTGTAGCAAATGGTGGAAGAAAGTACTTTGTTTTGTTAATAATCACAGATGGAGTGGTGACAGATCTTCAAGAAACAAAAGATGCCATTGTTAAAGCATCTGACTTGCCATTATCAATCCTTATTGTTGGGGTAGGAGGTGCTGATTTCAAAGAAATGGAGGTTTTAGATGCTGACAAGGGAGAGAGGCTTGAAAGTTCATATGGACGCGTTGCTTCACGCGATATAGTTCAATTTGTTCCATTTCGGGAGGTTCAAAGTGGATTTTCAGTTGTTCAAGCACTTCTAGCAGAATTACCGACTCAATTTTTAACTTATGTGCGGAGCAGAAATATCCAACCAAGCCTCTAG 852 0.4343 MDLLVANFVGLEAKLAGLTKVGQYVKTVLGPQFTLRNHLWVPQNSNLLRPFSDSTAASNGNPRLPDSLHFIDPSGRPNAYQRAIVEVGEVLQFYDSDKRFPTWGFGARPIDGPVSHCFNLNGSSHYCEVEGIQGIMMAYTSALHNVSLAGPTLFGPVISTAALIASQSVANGGRKYFVLLIITDGVVTDLQETKDAIVKASDLPLSILIVGVGGADFKEMEVLDADKGERLESSYGRVASRDIVQFVPFREVQSGFSVVQALLAELPTQFLTYVRSRNIQPSL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01780 283 Pfam Copine 67 281 IPR010734 -
Spst9g01780 283 SUPERFAMILY vWA-like 76 229 IPR036465 -
Spst9g01780 283 PANTHER COPINE 56 282 IPR045052 GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01780 Spst-Chr9 20039068 20042941 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01780 - - gmx:100778693 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01780 9 20039068 20042941 Spst9g01780 9 20039068 20042941 ECH
Spst3g01197 3 15497379 15509926 Spst9g01780 9 20039068 20042941 PCT