Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01759 ATGGGTACTTCTCCTCATTCCGTTGAAGCTCGACACCGTTTACCTGCATCCATGTGGAGCAGTGAAGATTTATACAAACGAAGATTGCCAAGAAGCAAAGCAAAAGATGCAGAAAAGCCTTTCCACTTATCTGTCCAAGATAGGAGCCCAAGATGCAAGTTTTCTTTCTTAAAACTCATCCTATTCATAACCATATGCGGCACTTTTGTAACACTACTCTATTCTCCAGAGGTTTATAATACCAACCATTTATCAAGCTCAGGCTCTAGGTGGATATGGGGTGGTTCAGATCCTCGTTACATGTCCAATGTAGACACTCACTGGGATGACATACTGAAAATTACGGATAAGCTGACAGGGGAAGATGAACTTCAAGGAATTGGGCTTGTAAATTTCAACAAGACTGAACTAGCTCATTGGGAGCATCTTATTCCTGACGCAACACATGTTGTTCTGCCTCTGGAGTATGCTGCAAGAAATGTGACATGGGAATCCTTGTACCCGGAATGGATTGATGAGGAAGAGGAAACTGAAGTTCCTGTCTGTCCTTCTCTGCCTAGTCTTAGGTCCCCTGGCATAAGACTGAACCTCATTGCTGTGAAGCTTCCTTGTAGGAATGGAGGGAATTGGTCTAGAGATGTTGCTCGTTTGCACCTTCAGCTTGCAGCCGCTGGCCTTGCAACCTCTTTCAAAGGCAACTACCCCGTTTATGTGCTCTTCATTACCAACTGCTTTCCAATACCAAATCTGTTCACATGTAAAGAGCTAGTTGGACGTGAAGGGAATGTGTGGTTATACAAACCAAACTTGAGTGTCTTGAGAGAAAAAGTCCAGCTTCCAGTAGGGTCTTGTGAACTTGCACTTCCTATGAGAGGCAAAGAGTTGGCTTACAATGGGAATGCTCCTAGAGAAGCCTATGCAACAATTCTGCATTCAGCTCATGTGTACGTTTGTGGGGCTATAGCTGCTGCACAAAGCATCCGCATGTCTGGATCAAGTCGAGACTTCGTAATACTTGTTGATGAGACGATCAGTGGCTATCACAGAAGTGGTTTGGAAGCAGCAGGATGGAAAGTTAGAACAATACAAAGGATCAGAAACCCCAAAGCTGAAAAAGATGCTTACAATGAATGGAACTACAGCAAGTTCAGGCTATGGCAGTTGACAGATTATGACAAGATAATATTCATTGATGCAGATTTGCTCATACTAAGAAATATAGATTTCCTATTTGGAATGCCAGAAATCACTGCCACCGGAAACAATGCCACTCTTTTCAACTCCGGTGTCATGGTGGTTGAGCCATCAAATTGCACATTCCAGCTCCTGATGGATCACATAAACGAGATTGAGTCCTACAATGGAGGGGACCAAGGATATTTGAATGAAATATTCACATGGTGGCACAGGATACCAAGGCACATGAACTTCTTGAAGCATTTTTGGATTGGTGATGAGGAAGAGAAGAAACAAATGAAAACTATGTTGTTTGGTTCGGAGCCTCCAATTTTGTATGTCCTTCACTATCTAGGTGTGAAGCCATGGTTATGCTTCCGGGACTACGATTGCAACTGGAACGCTGATATCTTTCATGAATTTGCAAGTGATGTTGCACATGCAAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGCTTTTGCAGCAGTTTTGTCTGCTGAAATCAAAGCAGAAGGCACAGTTGGAGTGGGATCGTAAGCAGGCTGAAATAGCAAACTACACAGACGGGCATTGGAGAATAAAAGTTAAAGATAGACGCTTGAAGAAATGTATAGATAATTTGTGCAACTGGAAAAGCATGTTGCGGCACTGGGGAGAGACAAATTGGACTGATGATGAGTTTTATACTCCAACACCACCTACCATTACCGCAGCGTCTCTTTCTGCTTTATGA 1911 0.4328 MGTSPHSVEARHRLPASMWSSEDLYKRRLPRSKAKDAEKPFHLSVQDRSPRCKFSFLKLILFITICGTFVTLLYSPEVYNTNHLSSSGSRWIWGGSDPRYMSNVDTHWDDILKITDKLTGEDELQGIGLVNFNKTELAHWEHLIPDATHVVLPLEYAARNVTWESLYPEWIDEEEETEVPVCPSLPSLRSPGIRLNLIAVKLPCRNGGNWSRDVARLHLQLAAAGLATSFKGNYPVYVLFITNCFPIPNLFTCKELVGREGNVWLYKPNLSVLREKVQLPVGSCELALPMRGKELAYNGNAPREAYATILHSAHVYVCGAIAAAQSIRMSGSSRDFVILVDETISGYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNATLFNSGVMVVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKQMKTMLFGSEPPILYVLHYLGVKPWLCFRDYDCNWNADIFHEFASDVAHAKWWKVHDAMPELLQQFCLLKSKQKAQLEWDRKQAEIANYTDGHWRIKVKDRRLKKCIDNLCNWKSMLRHWGETNWTDDEFYTPTPPTITAASLSAL 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01759 636 PANTHER GLYCOGENIN SUBFAMILY MEMBER 210 596 - -
Spst9g01759 636 Pfam Glycosyl transferase family 8 310 516 IPR002495 GO:0016757
Spst9g01759 636 FunFam Hexosyltransferase 301 553 - -
Spst9g01759 636 SUPERFAMILY Nucleotide-diphospho-sugar transferases 303 549 IPR029044 -
Spst9g01759 636 CDD GT8_Glycogenin 304 549 - -
Spst9g01759 636 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 302 551 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01759 Spst-Chr9 19447118 19452808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01759 9 636 Glycosyltransferase AT3G18660 66.047 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01759 K20890 - gmx:100780439 1268.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01759 9 19447118 19452808 Spst9g01759 9 19447118 19452808 ECH
Spst9g01759 9 19447118 19452808 Spst3g01325 3 16686973 16691791 ECH
Spst3g01325 3 16686973 16691791 Spst9g01759 9 19447118 19452808 PCT