Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01662 ATGCGAAGCCGCAAAAGCAGAAGAAAAGAGAACGTGGAGTTTCCAAAAGTTGAAAGAAAGAAAGAAAGGACCTTTGTACCTTCCTCTGTCTCTCATGGCAATCATCTTCTCTTCCTGCAGGTTCGTCAAACCCAACCAATGGAGGAGCCAGGATCTGAACCAGCACCAACACCACCGCCACCACCACCACCCCCAATCTCCCTCGTCCAACCCTCCCAAAAAAAGCGTCTCAGACCCAAAGTAATTCGTGTCTTCCGCTCCGTCTTTCGCTCCCTTCCCATCATAACGCCCTGCAAGTTCCCCTCCATCCCAACCGACACCAACAACCACCATAAAACCGTCAACAACGGCACAAAAGTCTCTGGCACCTTCTTCGGCCGCAGCAAGGGCCGAGTCAGCCTCTCAGTCCAGGAAAACCCCCGCTGCCTCCCCACCCTCATCGTCGAGCTCTCCATGCAAACCAACTCCTTGCAGAAGGAAATGGCCGCCGGAATGGTCAGGTTGGCGCTCGAGTGCGAGAAGCGTTCGGAGAAGGACAAGACCATGATCGCGGAGGAACCCTTGTGGGCCATGTACTGCAACGGGAAGAAGAATGGGTACGGCGTGCGGAGGAACGCCACGGAGGAGGACTTGTACGTGATGGAGGTTCTGAAGGCTGTGACGATGGGCGCCGGTGTGCTTCCGTTGAAATCCGAGGCTGATGACGGCGGCGGCGACGGAGGAGAGTTGGCGTACATGCGAGCACCGTTCGAACACGTAGTGGGCTCCAAGGATTCCGAGACTCTGTATATGATGAGCCCGGACCTGCAGGGTAATAGTGGTCCCGATCTTACTATATTTTTTGTCAGGGTTTAA 855 0.5497 MRSRKSRRKENVEFPKVERKKERTFVPSSVSHGNHLLFLQVRQTQPMEEPGSEPAPTPPPPPPPPISLVQPSQKKRLRPKVIRVFRSVFRSLPIITPCKFPSIPTDTNNHHKTVNNGTKVSGTFFGRSKGRVSLSVQENPRCLPTLIVELSMQTNSLQKEMAAGMVRLALECEKRSEKDKTMIAEEPLWAMYCNGKKNGYGVRRNATEEDLYVMEVLKAVTMGAGVLPLKSEADDGGGDGGELAYMRAPFEHVVGSKDSETLYMMSPDLQGNSGPDLTIFFVRV 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01662 284 MobiDBLite consensus disorder prediction 1 26 - -
Spst9g01662 284 PANTHER PROTEIN MIZU-KUSSEI 1 45 284 IPR006460 GO:0010274
Spst9g01662 284 MobiDBLite consensus disorder prediction 1 75 - -
Spst9g01662 284 MobiDBLite consensus disorder prediction 27 47 - -
Spst9g01662 284 MobiDBLite consensus disorder prediction 51 69 - -
Spst9g01662 284 Pfam Protein of unknown function, DUF617 120 283 IPR006460 GO:0010274
Spst9g01662 284 NCBIfam uncharacterized plant-specific domain TIGR01570 120 284 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01662 Spst-Chr9 16896757 16897611 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01662 - - gmx:100792553 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01662 9 16896757 16897611 Spst9g01662 9 16896757 16897611 ECH
Spst3g01492 3 18372057 18372749 Spst9g01662 9 16896757 16897611 PCT