Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01492 ATGGCCAATGGCGTCACTACAGTTGAATGCGAGAAACAAGTTAGATCATGGAGGGTGCTACGTTCTCTCATGCAACTCCTAATACCCACATGCAACTGTGCCACCATTATAGAAGACCAAGATGTAACATCAAACGAGTGCCACCGATACCCCACCAGATACTATTCACCATCACTCGTGATGAGCTCCACCACCATCACTGGCACCATCTTCGGATACCGCAGAAGAAAGGTGAGCTTCTGCATTCAGGCAAACGCCAACTCCAACCCTATTCTCCTCCTAGAGTTGGCAGTTCCAACAACCATCTTGGCCAAGGAAATGAGAGGAGGAACTCTCAGAATCGCTCTGGAGTGTGGCAATGGTGACAGTGACGATAATAATAACAACACAAACACGCTTTTGTCCACTCCTCTGTGGACTATGCACTGTAATGGGAGGAAAGTGGGGTATGCCGTTAAGCGTAGACCCTCCAAAAGTGATTTTGAAGCGTTGAGGATGATGCGTTCCGTTGTGGTGGGAACCGGGGTGATGAAGTGCAAGGAAATGATTAACAAAGAAGATGGTCACCTTATGTACCTTAGAGGGAGGTTTCAGAGGGTTCGTGGCTCAGAAAACTGTGAATCATTCCACTTGATTGATCCTGAAGGGGACATGGATCAGGAACTTAGTGTTTTCTTTTTTAGGTCCAGGTGA 693 0.4719 MANGVTTVECEKQVRSWRVLRSLMQLLIPTCNCATIIEDQDVTSNECHRYPTRYYSPSLVMSSTTITGTIFGYRRRKVSFCIQANANSNPILLLELAVPTTILAKEMRGGTLRIALECGNGDSDDNNNNTNTLLSTPLWTMHCNGRKVGYAVKRRPSKSDFEALRMMRSVVVGTGVMKCKEMINKEDGHLMYLRGRFQRVRGSENCESFHLIDPEGDMDQELSVFFFRSR 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01492 230 Coils Coil 227 230 - -
Spst3g01492 230 Pfam Protein of unknown function, DUF617 66 228 IPR006460 GO:0010274
Spst3g01492 230 PANTHER - 3 230 - -
Spst3g01492 230 NCBIfam uncharacterized plant-specific domain TIGR01570 66 229 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01492 Spst-Chr3 18372057 18372749 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01492 - - gmx:100794628 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01492 3 18372057 18372749 Spst9g01662 9 16896757 16897611 PCT