Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01463 ATGGCTTGCGTGGCACTTCGTCCTGTGCGTGAAGAATCTTTCAACACCGGTGGTGAATTCACCGGCTGTTTTAACCCACTTTTGAGGGACTCAATTTTGATTCACCTAACTGTTGGTGGATCTGTGATTCCTATGCGTATTATGGGGACAGATTCAATTGCTTCAGTGAAGCTGAGAATTCAAACCTTCAAAGGATTTTTCGTAAAAAAGCAGAAACTGGTTTTTGAAGGGAAGGAGTTGGCTCGTAACAGATCTTGTATCCGTGATTATGGTGTTGGTGATGGGAATGTTCTGCACCTGGTGCTGAGGCTTTCTGATCTCAAAGCTATCACAGTTAGGACTGTATGTGGAAAGGAGTTTGGGCTTTATGTTGAGAAGAGTAGGAGTGTGGGTTATGTGAAGCAGCAGATAGCAAAAAAAGGGCAAGGGTTAGTTGATCTCAAGAATCAAGAACTGATATGTGAGGGTGAGGCTCTTGAAGACCAGAGACTTATTGAGGATATCTGTAAGGATAATGATGCTGTAATTCATTTTTTGGTTAGAATATCAGATGCCAAGGTGAGGACTAAACCAGTTGAGAAGGATTTTGAATTATCAATTGAGGCATCATATGCAAACAATCTGGTGCCAAATTTACATACAAACCAGTTAGGGCCAGTCTCTGTAACAAATGAGATCCTGGAAAGGAATCAATTATCAAGGGATTATCTTGTGGAACCAATTATTATGAATTCCAACATAAAATTTCCACCAGTGATCCACGAGCTAATTAAGATCACTTCGGAGGGGCTAGAAAAAGGCTGTAAACCAATTCAATCTTCAGAGGGATCTGGAGGAGCTTATCTCATGCAAGATTCATCTGGCTCGAAGTATATTTCTGTTTTCAAACCCATTGATGAAGAGCCAATGGCAATTAATAACCCTCGAGGCCTACCTATTTCCGAGGATGGTGAAGGGCTAAAGAAAGGTACACGGGTAGGGCAAGGTGCATTGAGAGAAGTTGCAGCTTACATTTTGGATCATCCTAGGAAAGGACCACGCTCATATCATAACAATGAGGAACCAGGATTTGCTGGAGTTCCTCCTACTGTCATGGTCAAATGCCTGCATAAAGGATTTCATAATGTTGAAGGTTATCAGAATGTTTCAGGTAATGTTAAAATAGGATCGCTTCAGATGTTTATGAGGAATATTGGAAGTTGTGAAGACATGGGCCCTAGTGCTTTTCCAGTGGAAGAGGTACACAAGATCTCTGTGCTGGATATAAGGTTGGTAAATGCAGATAGGCATGCTGGCAACATTTTGATTGCCAAGGATGGTGAAGACGGTTCAACTATTCTCATTCCAATTGATCATGGCTATTGCTTGCCCGAGAGCTATGAAGACTGCACTTTTGACTGGTTATACTGGCCACAAGCTAAGGAACCTTACTCTACAGACACCATTGATTATATAAAATCTCTGGATGCTGAAGAAGATATTAAGCTTTTAAAGTTTCATGGATGGGATCTTCCTCCTATGTGTGCCCAGATCCTTCGTATATCAACCATGCTTCTTAAAAAAGGTGCAGAGAGAGGACTCACTCCTTTTGCCATAGGAAGCATCATGTGTAGAGAAACACTGAAGAAAAAATCTGTCATTGAACAGATTGTGCAGGAAGCTGAGGAAGCTGCATTTCCTGGAGCAAGTGAAGGTGCATTTCTCGATATCGTTTCAGCGATCATGGATAGTCATTTGGATGAGCTATTCCCGTGA 1755 0.4165 MACVALRPVREESFNTGGEFTGCFNPLLRDSILIHLTVGGSVIPMRIMGTDSIASVKLRIQTFKGFFVKKQKLVFEGKELARNRSCIRDYGVGDGNVLHLVLRLSDLKAITVRTVCGKEFGLYVEKSRSVGYVKQQIAKKGQGLVDLKNQELICEGEALEDQRLIEDICKDNDAVIHFLVRISDAKVRTKPVEKDFELSIEASYANNLVPNLHTNQLGPVSVTNEILERNQLSRDYLVEPIIMNSNIKFPPVIHELIKITSEGLEKGCKPIQSSEGSGGAYLMQDSSGSKYISVFKPIDEEPMAINNPRGLPISEDGEGLKKGTRVGQGALREVAAYILDHPRKGPRSYHNNEEPGFAGVPPTVMVKCLHKGFHNVEGYQNVSGNVKIGSLQMFMRNIGSCEDMGPSAFPVEEVHKISVLDIRLVNADRHAGNILIAKDGEDGSTILIPIDHGYCLPESYEDCTFDWLYWPQAKEPYSTDTIDYIKSLDAEEDIKLLKFHGWDLPPMCAQILRISTMLLKKGAERGLTPFAIGSIMCRETLKKKSVIEQIVQEAEEAAFPGASEGAFLDIVSAIMDSHLDELFP 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01463 584 Gene3D - 29 106 - -
Spst9g01463 584 SMART ubq_7 32 103 IPR000626 GO:0005515
Spst9g01463 584 SMART ubq_7 108 181 IPR000626 GO:0005515
Spst9g01463 584 FunFam Phosphatidylinositol 4-kinase gamma 4 29 108 - -
Spst9g01463 584 Pfam Ubiquitin family 38 104 IPR000626 GO:0005515
Spst9g01463 584 Pfam Ubiquitin family 110 181 IPR000626 GO:0005515
Spst9g01463 584 SUPERFAMILY Ubiquitin-like 104 183 IPR029071 -
Spst9g01463 584 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 267 566 IPR000403 -
Spst9g01463 584 CDD Ubl_ubiquitin_like 110 177 - -
Spst9g01463 584 Gene3D - 109 197 - -
Spst9g01463 584 SUPERFAMILY Protein kinase-like (PK-like) 418 583 IPR011009 -
Spst9g01463 584 ProSiteProfiles Ubiquitin domain profile. 30 103 IPR000626 GO:0005515
Spst9g01463 584 SUPERFAMILY Ubiquitin-like 37 105 IPR029071 -
Spst9g01463 584 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 41 557 IPR044571 -
Spst9g01463 584 Pfam Phosphatidylinositol 3- and 4-kinase 276 531 IPR000403 -
Spst9g01463 584 ProSiteProfiles Ubiquitin domain profile. 108 185 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01463 Spst-Chr9 14750805 14753216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01463 1 581 Acyl Lipid Metabolism Gene Families AT5G24240 61.340 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01463 - - gmx:100812724 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01973 4 60389969 60392398 Spst9g01463 9 14750805 14753216 ECH
Spst9g01463 9 14750805 14753216 Spst9g01463 9 14750805 14753216 ECH