Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01324 ATGCCAGCTTCTCCTTCAGAGAACCGAACCAGATGGAGGAAGCGCAAGAGAGATTCACAAATCACCAGGCGCCACCCCAAGCACGAGGAAGAGGACGACGACGACGAAGAAAACCCCAATGCGGAGGATGACCACGCCGAACGCGAGTACGATTCCGAGGAACAAACGCACCACCATCACAACCACCCTAATTCGCTACCTCATGTGGAGACGGAGGTGCTATCCGACCATGGTGTTCCAATTTCGCAGTTCCCGGCAGTGATAAAGCGCTCCGTGAACCGCCCTCACTCCTCCGTCACCTCAATTGTGGCTCTGGAGCGAGCCCTTGAGTCTGGAGACAACAAGGCTCATAGCGCTCTCACTGCACCAGTTCTTGAGAACGTGTCTCACGGCCAGCTTCAAGCACTGTCGTCTGTGCCATCTGATAACTTTGCATTTGATGGTGATTCCTCTTTCGTCATCACTCCCCCTCCCATATTGGAAGGTCGTGGTGTTGTTAAGCGCTTTGGAGCTAAGGTTCTTGTAGTTCCAATGCATTCAGATTGGTTTTCGCCTGCCACCGTGCATAGGTTGGAGAGGCAAGCAGTGCCACATTTCTTTTCAGGGAAATCACCGGATCATAGTCCGGAGAAGTACATGGAGTGTAGAAACTGCATTGTGGCATTGCACTTGGAGGACCCTGGGAAGAGGATTACGGTTTCTGATTGCCAAAGTCTGTTGACTGGGGTTGACGTTGAAGATTTGACTCGGATTGTCAGGTTCCTTGATCATTGGGGGATTATTAATTATTGTGTTCGGATGCCGAGTCTTGAGTCTCCTAATTTTGTATCTTGCCTGAGGGAGGAGCCATGTGGAGAGGTCCGTGTCCCGGCAGAGGCTTTGAAATCTATAGATAGTTTGATCAAATTTGACAATCCCAATTGTAAGTTGAAAGCAGACGAAATTTATTCGTCATTGACAGCACATAATGCCGATGTCTTTGATCTGGAGGACAGAATAAGAGAGCATCTATCGGAGAATCATTGCAATTATTGTTCTCGTCCGCTCCCTGCCGTATACTACCAGTCTCAAAAAGAGGTTGATATCTTACTCTGCATTGATTGCTTTCATGATGGGAGATTTGTCATGGGTCATTCAAGTATAGATTTTTTAAGGGTGGATTCGACAAGGGACTATGGTGAACTAGACGGGGATAATTGGACTGATCAAGAAACTTTACTGCTTCTCGAAGCAATGGAGATTTACAATGAGAATTGGAATGAAATTGCTGAGTATGTCGGTACCAAGTCAAAAGCACAATGCATTCTTCATTTTCTCCGTCTACCCATGGAAGATGGAAAATTGGAAAACATTAATGTTCCAAGCATGTCTTTGTCATCCAATGCAATGAATAGAGACGGTAGTGGAAGACTGCATTGTTACTCAAATGGAGATACTGCAGGACCTGTCCATCAAATCAGAGATTCTGACAGCCGGCTTCCTTTTGCAAATTCTGGAAATCCTGTTATGGCTTTGGTTGCCTTTTTAGCCTCTGCAGTTGGACCAAGAGTAGCCGCTTCTTGTGCTCATGCAGCATTAGCAGTATTGTCAGTGGATAATTCTGGCAGCAGTTCACAGGTGGAAGCACCAGGACATGATAATAGGATCAATTCAGAAAGCAATCATTCTCGAGATGGTGGGCCTCATGGAGAAACAGCAGTATCAAATAATAATAATGAGGATAAGGCAAAGTTACATGGTTCATGGGGTCTAAATGATGGTAGGACAACCCCACTATCTGTTGAGAAAGTTAAAGATGCTGCTAAAGCAGGCCTCTCTGCGGCAGCAATGAAAGCAAAATTATTTGCCGATCATGAAGAGCGAGAAATTCAGAGGTTGTGTGCTAACATAGTTAATCATCAGGTATCCCTGTTCTGTTGTGTCCATTTCTGTCTGGACGTGGCTTGCTGTTATTGGCAGCTGAAAAGATTGGAATTGAAGCTGAAACAGTTTGCGGAAATTGAAACGTTGTTGATGAAAGAATGCGAGCAACTGGAGAGAACAAAGCAAAGGTTTGCTGCTGAACGGTCTCGCATAATATCAGCACGTCTTGGAACTGCGGGAGCCACACCCACAATGACTGCATCAGGTGTTGGTCCTTCAATGGGCAGTAACGGTAACAATAGGCAACAAATGATCTCTGCTTCTTCCTCACAGCCCAGCATCTCAGGGTATGGCAACAACCAACCAGTTCATCCTCATATGTCTTTTGCCCCACGACCTTCAATGTTTGGGTTGGGGCAAAGATTACCGTTATCTATGATACAACAATCACAATCAGTTTCTTCTACTGCCATGTTCAATGCCCCTAGTAATGTGCAGCCCACAACCAATCATCCATTGTTGAGGCCGGTGTCAGGAACTAACTCTGGTTTAGGTTAA 2421 0.4589 MPASPSENRTRWRKRKRDSQITRRHPKHEEEDDDDEENPNAEDDHAEREYDSEEQTHHHHNHPNSLPHVETEVLSDHGVPISQFPAVIKRSVNRPHSSVTSIVALERALESGDNKAHSALTAPVLENVSHGQLQALSSVPSDNFAFDGDSSFVITPPPILEGRGVVKRFGAKVLVVPMHSDWFSPATVHRLERQAVPHFFSGKSPDHSPEKYMECRNCIVALHLEDPGKRITVSDCQSLLTGVDVEDLTRIVRFLDHWGIINYCVRMPSLESPNFVSCLREEPCGEVRVPAEALKSIDSLIKFDNPNCKLKADEIYSSLTAHNADVFDLEDRIREHLSENHCNYCSRPLPAVYYQSQKEVDILLCIDCFHDGRFVMGHSSIDFLRVDSTRDYGELDGDNWTDQETLLLLEAMEIYNENWNEIAEYVGTKSKAQCILHFLRLPMEDGKLENINVPSMSLSSNAMNRDGSGRLHCYSNGDTAGPVHQIRDSDSRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALAVLSVDNSGSSSQVEAPGHDNRINSESNHSRDGGPHGETAVSNNNNEDKAKLHGSWGLNDGRTTPLSVEKVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIVNHQVSLFCCVHFCLDVACCYWQLKRLELKLKQFAEIETLLMKECEQLERTKQRFAAERSRIISARLGTAGATPTMTASGVGPSMGSNGNNRQQMISASSSQPSISGYGNNQPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQSVSSTAMFNAPSNVQPTTNHPLLRPVSGTNSGLG 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01324 806 Pfam Myb-like DNA-binding domain 399 441 IPR001005 -
Spst9g01324 806 ProSiteProfiles Zinc finger ZZ-type profile. 337 391 IPR000433 GO:0008270
Spst9g01324 806 FunFam SWI/SNF complex subunit SMARCC2 isoform C 396 446 - -
Spst9g01324 806 Gene3D - 396 446 - -
Spst9g01324 806 SMART sant 396 444 IPR001005 -
Spst9g01324 806 SUPERFAMILY Homeodomain-like 397 450 IPR009057 -
Spst9g01324 806 ProSiteProfiles SANT domain profile. 395 446 IPR017884 -
Spst9g01324 806 MobiDBLite consensus disorder prediction 534 584 - -
Spst9g01324 806 Gene3D - 180 267 IPR036388 -
Spst9g01324 806 FunFam SWI/SNF complex subunit SMARCC2 isoform c 180 268 - -
Spst9g01324 806 Pfam SWIRM-associated region 1 603 635 IPR032451 -
Spst9g01324 806 Pfam SWIRM-associated region 1 653 699 IPR032451 -
Spst9g01324 806 MobiDBLite consensus disorder prediction 1 68 - -
Spst9g01324 806 CDD SANT 399 441 IPR001005 -
Spst9g01324 806 MobiDBLite consensus disorder prediction 43 66 - -
Spst9g01324 806 MobiDBLite consensus disorder prediction 780 806 - -
Spst9g01324 806 ProSiteProfiles Myb-like domain profile. 392 442 IPR001005 -
Spst9g01324 806 PANTHER SWI/SNF COMPLEX-RELATED 67 695 - -
Spst9g01324 806 ProSiteProfiles SWIRM domain profile. 174 272 IPR007526 GO:0005515
Spst9g01324 806 Pfam SWIRM domain 177 263 IPR007526 GO:0005515
Spst9g01324 806 SUPERFAMILY Homeodomain-like 173 267 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01324 Spst-Chr9 12874592 12880212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01324 342 438 EF-hand Containing Proteins AT3G07740 33.019 3.93e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01324 K11649 - gmx:100780440 1396.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01324 9 12874592 12880212 Spst9g01324 9 12874592 12880212 ECH
Spst8g01376 8 12881288 12886752 Spst9g01324 9 12874592 12880212 PCT