Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01223 ATGGAAAATCTACAGTTAGAGGAGACAAATGGAGTGAATTCTCAAGCTGTTGAGAACCTGCGGGTAGATGATTTGGTTTTTGACCAGGAGAAACAATCAAAGGAAGTGAAAGCTCAGAATATTGGTCATGATGGTCCCGACTTCGATGATATATCAGATGCGGAAGATGTAAGGTCTAAGAGGAAAGATGAGGGCAGGGGTTTGCAATGTGAAACTCCACTGGAATACTCGGAAACCAAATCTGAAACTGAAGTTATTGCTGATAAGCAAGAGGATTCTGATGATAAGATGAATGCTGGTGGAGATCTGGAGTCTAAAAACCAAGAAACAAATCCGAATGTAGATGATAATTGTGGTCAGAGTGACTTGGCTAAAGAAGTGGATGATAGGGAATTAACGCAGATGTTTGATAAGTCAGATGAAATTCCAAGCGAGGACCCCAATTTGGAGCCTGTATTTGATGGAACAGAGGTTCCAGGGATGGAAGCTAACCGTAGTATGTCTGGCCGTAGGTTGGACGTAGATCAGGACTCCCCAGGTGTGGTTGAGAAGGCTGTGGCTCTTAAGAATTTTGTTAAAGAGAAGAGCGCAGTGGCAGTTTCCACCATGATGCGTCGCCTTTCTGGAAAAAGAGAGGAAGGTGCTGTGGATAATGTTGATGATGAAGGTAAGGATGTATCAGACATTGGAAAAGTTGGAGAAAACAAAGTGATGTCTGAGAAGGCAGTGGAGAAATTTGACTGGAATCCCTTAAATTACATAAAGAAGTCATCCGATGTTGGTGTGGATAGAAAAACTGAGCAGAGGGACTCAATAGTCATGAAAGGAAGGATTATACTGTATACAAAACTAGGGTGCCAAGAATCTAAAGAGATTAGGCTGTTTTTGCGTTTGAAAAGGCTTAGATATGTCGAAATCAACATTGATGTGTTCCCTAGTAGAAAGAAGGAGCTGGAGAAGATTTCCGGATCTACTTCTGTACCTAAGGTTTTTTTCAATGAAATACTTATTGGAGGCTTGAGTGAGCTTAAGACTCTAGATGAGTCTGGCAAGCTTGACGAGAAGGTTGACTTTCTTATTACTGAAGCACCATTATTTGAGGCCCCATCACCACCACTCTCTGGAGAGGATGATGAGCCCAGTAGTGGACTAACTGATGAAATGGCAGTTATTGTCCGCAAAATGAAAGAGTCTATTGCTGTGAAGGACCGGCTTTATAAAATGCGCAGGTTCACTAACTGTTTTATTGGCTCAGAAGCTATCGACTTCTTATCAGAAGATCAATATTTGGAAAGACCAGAGGCTGTTGAGTTTGCACGAAAGCTTGCTGACAAACTCTTCTTTCGACATGTTATTGATGAGAATCTATTTGAGGATGGAAATCACCTGTATCGGTTTTTGGATGATGACCCCATTGTAGTCTCACAATGTCATAACATTCCTAGAGGCATACTAACCTTGAAGCCCAAGCCTTTAGCAGAAATTGCGTCAAGACTGAGGTTTCTGTCCCGTGCAATATTTGAAGCCTATGTTTATGAAGATGGACGTCGTGTTGATTATACAAGTATACATGGAAGTGAGGAGTTCGCAAGGTATCTGAGAATTGTCGAAGAGCTGCAGAGAGTGGAAATATCGGATTCGTCTAGAGAAGAGAAGCTTGCTTTCTTCATTAATCTTTATAATATGATGTCCATCCATGCAATCTTAGTGTTGGGCCATCCTGATGGAGCACTTGAAAGAAGGAAATTATTTGGAGAGTTCAAATATGTTATTGGTGGGTCCACCTACTCACTTTCAGCTATACAAAATGGCATCTTAAGGGGAAACCAGCGACCTCCATATAACCTTAAGAAGCCATTTGGTGCAAAAGATAAACGATCGACGATGGTACTTCCTTATCCTGAGCCTCTTATTCATTTTGCTTTGGTATATGGTACCCGATCTGGACCTACACTTCGGTGCTACTCTCCTGGAAAGATTGATGAAGAGTTATTGGATGCAGCCCGTAATTTTTTAAGAAATGGAGGCGTTGTAATTGATTTGAGTGCAAAGGCTGTAAATGCTAGTAAGATCCTTAAATGGTATAGTATAGATTTTGGCAAGAACGAGGTAGAGGTGATAAAGCATGTTTCAAACTATTTAGATCCAGCTGACTCAGAAGTATTGTTGGACCTACTTGCTACTTCCGAGTTGAAGGTGACATATCAGCATTATGACTGGGGCTTGAACTGCTAG 2235 0.4139 MENLQLEETNGVNSQAVENLRVDDLVFDQEKQSKEVKAQNIGHDGPDFDDISDAEDVRSKRKDEGRGLQCETPLEYSETKSETEVIADKQEDSDDKMNAGGDLESKNQETNPNVDDNCGQSDLAKEVDDRELTQMFDKSDEIPSEDPNLEPVFDGTEVPGMEANRSMSGRRLDVDQDSPGVVEKAVALKNFVKEKSAVAVSTMMRRLSGKREEGAVDNVDDEGKDVSDIGKVGENKVMSEKAVEKFDWNPLNYIKKSSDVGVDRKTEQRDSIVMKGRIILYTKLGCQESKEIRLFLRLKRLRYVEINIDVFPSRKKELEKISGSTSVPKVFFNEILIGGLSELKTLDESGKLDEKVDFLITEAPLFEAPSPPLSGEDDEPSSGLTDEMAVIVRKMKESIAVKDRLYKMRRFTNCFIGSEAIDFLSEDQYLERPEAVEFARKLADKLFFRHVIDENLFEDGNHLYRFLDDDPIVVSQCHNIPRGILTLKPKPLAEIASRLRFLSRAIFEAYVYEDGRRVDYTSIHGSEEFARYLRIVEELQRVEISDSSREEKLAFFINLYNMMSIHAILVLGHPDGALERRKLFGEFKYVIGGSTYSLSAIQNGILRGNQRPPYNLKKPFGAKDKRSTMVLPYPEPLIHFALVYGTRSGPTLRCYSPGKIDEELLDAARNFLRNGGVVIDLSAKAVNASKILKWYSIDFGKNEVEVIKHVSNYLDPADSEVLLDLLATSELKVTYQHYDWGLNC 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01223 744 SUPERFAMILY Thioredoxin-like 267 356 IPR036249 -
Spst9g01223 744 SMART DEP_3 395 468 IPR000591 GO:0035556
Spst9g01223 744 ProSiteProfiles DEP domain profile. 395 468 IPR000591 GO:0035556
Spst9g01223 744 MobiDBLite consensus disorder prediction 103 118 - -
Spst9g01223 744 MobiDBLite consensus disorder prediction 1 20 - -
Spst9g01223 744 MobiDBLite consensus disorder prediction 1 17 - -
Spst9g01223 744 Pfam Protein of unknown function, DUF547 546 672 IPR006869 -
Spst9g01223 744 ProSiteProfiles Glutaredoxin domain profile. 266 363 - -
Spst9g01223 744 Gene3D Glutaredoxin 273 358 - -
Spst9g01223 744 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 399 466 IPR000591 GO:0035556
Spst9g01223 744 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 55 744 - -
Spst9g01223 744 Gene3D - 384 472 IPR036388 -
Spst9g01223 744 MobiDBLite consensus disorder prediction 77 102 - -
Spst9g01223 744 SUPERFAMILY "Winged helix" DNA-binding domain 388 472 IPR036390 -
Spst9g01223 744 CDD DEP 387 465 - -
Spst9g01223 744 MobiDBLite consensus disorder prediction 121 145 - -
Spst9g01223 744 MobiDBLite consensus disorder prediction 31 163 - -
Spst9g01223 744 Pfam Glutaredoxin 278 334 IPR002109 -
Spst9g01223 744 MobiDBLite consensus disorder prediction 31 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01223 Spst-Chr9 11568921 11572190 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01223 - - gmx:100820242 1248.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01223 9 11568921 11572190 Spst9g01223 9 11568921 11572190 ECH
Spst8g01278 8 11897929 11904635 Spst9g01223 9 11568921 11572190 PCT