Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01278 ATGAAAAAAAGAGAATTAGAAGAGACAGATGAGCCAAGTCCTCGGGCCGTTGGAGAGGTAGAAGGGGATTCGAGTGAAGAAGATAGGGAAAAACATTCAGTGCGGCCGAAAACTCAAAATGTAGGCTGTGATGTTTCTGAGTTTGGCAATGATCAAGAAGATGCATCGGACAATGTATGTTCTCAAGATGCTGAAAAACTGGAAGGAGACTGTTTTACCATTCAGAGTGAAGAACATGAGAAGGAATCAAAGCAGGGGAAAATTCAGAATATTAGTCATGATGCCCCTGAGTTTGATGATGAGCGAGAGAGTATGCCGGACGGGTTGGATGAAGTGATAGATGTAGAGTTGAGTACTTACGAGGAAATTAAAGACAATGTGGCAGTAGAACCTCAGTTGGCTCAACGGGTGGGGGATAATTGTGGTTTGCCGAGTGGACCTCAACAAGATGACTTGTTTCAAAAGGAGCATGAAAGTGATTCCATGGAACCTGAAGTTGAAGTTAGCATTATTGGACAAGAATGTCCTGGTGTTAAGGGAGAATGCAGTGGAGATTTTGAGCCTAAAAGTCAAGAAAATAGTTTTGTACAGCAGGGTTTGTCCATAGAGGAGGATGACAGCAGAAGCATGGAATCTGCACAAGCGAATCAAAAGACAGAGAACAGTTCAGAGTACAATAATTTGGAGCCTGAAGTTGGTGGAGCTGAGGTTCTTGGCTGTGAATGCAGCACATTTATGGATACTTCGCAGACTAATCCGGAGGCTCCGCGTGTGGTGGGGAAGACAATATCTCTTAGAGACTTTGTTAGGGAGAAAAGTATAATAGCAATGTCTATGGTGCTTCGTCACCTTTCTGGAAAAAGAGACGAATCTGCTGTGGGTAATTCTGGTGGTGTGGGTAAGGACACTTCAGATTTATCAAGAGAAAGTGATACGAAAGAGGTTTCTGAGAAGAGAGAGGAAACAACTTGGAACCCCTTATATTATATTAGACCATCATCTGATATTGTTGCTGAAAATAGAACTGTCCCGAGTGAGGAACCCATATCTGAAGGTCCACCACTACCTATAGTCATGAAAGGAAGGATTATAGTGTACACAAGACTAGGGTGCCCAGAATGTAAAGAGGTTAGGAAATTTTTGTATATGAAAAGGCTTAGATATGTTGAAATCAATATTGATGTGTATCCCAGTAGAAAGATGGAGCTGGAGAAGAAGTCAGGATCTACTTCTATTCCCAAGGTTTTTTTCAATGGAATACTTATTGGAGGGTTGAGTAAGCTTAAGTCCTTAAATGAGTCTGGCAAGCTTAATGAGAAGATTGACTACCTTATTAATGAAGTACCATCATTTGAATGCCCAGTTCCGCCACTTTCTGGAGAGGATGATGTATCCAGTAGAGGGGCACTTGATGAAATGGCTCTAATTGTCCGCAAAATGAAAGAATGCATTGTTGTGCAGGACCGATTTTTTAAAATGCGGAGGTTTACTAACTGCTTCATTGCTTCTGATGCCGTGGACTTCTTATCAGAAGATCAGTATTTGGAAAGGAAAGAGGTTTATGGTCTTGCTGTTGAGTTTGCACGAAAACTTGCCAGCAAACTCTTCTTTCAGCATGTTTTTGATGAGAATCTATTTGAGGATGGTAACCAACTATATCGGTTTTTGGATGATGATCCAACCGTGGCATCTTTTTGTCACAACATTCCCAGGGGGATAATTACTGTGAAACCTAAGCCTATGACCGAAGTTGCATCGAGGCTAAGACTTTTGTCCTATGCGATGTTTGAAGCCTATGCTTCTGAAGATGGCCGTCATGTTGACTACAGAAGTATGCATGGAAGTGAGGAATTTGCAAGATATCTAAGAATAATTGAAGAGCTCCAAAGAGGGGAAGTATGGAATTTGTCTAGAGAAGAGAAGCTTGCTTTTTTTATTAATCTATATAATATGATGGCCATCCATGCAATCTTAGTATGGGGTCACCCTTCTGGACCACTCGAAAGAAGGAAATTGTTTGGAGACTTTAAATATGTTATCGGTGGATTCACCTACTCACTTTCAGCCATTCAAAATGGCATTTTGAGGGGGAACCAGCGGCAACCATATACCCTTATGAAGCCATTCGGTGCAAAAGATAAACGTTTAAGGGTGGCCCTCCCCTTCCCCGAGCCCCTTATTCATTTTGCTTTAGTATATGGTACTCGATCTGGACCCTCACTTCGGTGCTATTCTCCCGGGGACATTGACAAAGAATTAATGGATGCAGCCCGTAATTTCTTAAGAAGTGGGGGCCTTTCAATAGATTTTACTGCAAAGGTTGCATATGCCAGTAAGATCCTTAAATGGTTTAGTCTAGATTTTGGTAAGAATGAGGTAGAGGTCCTGAAGCATGTGTCAAGCTACTTAGATCCAGCTGACTCAGAATTATTGTTTGACCTACTTGCCACTTCTGAGTTGAAGGTGATATATCAGCCTTACGATTGGGGTTTGAACTGCTAG 2502 0.4173 MKKRELEETDEPSPRAVGEVEGDSSEEDREKHSVRPKTQNVGCDVSEFGNDQEDASDNVCSQDAEKLEGDCFTIQSEEHEKESKQGKIQNISHDAPEFDDERESMPDGLDEVIDVELSTYEEIKDNVAVEPQLAQRVGDNCGLPSGPQQDDLFQKEHESDSMEPEVEVSIIGQECPGVKGECSGDFEPKSQENSFVQQGLSIEEDDSRSMESAQANQKTENSSEYNNLEPEVGGAEVLGCECSTFMDTSQTNPEAPRVVGKTISLRDFVREKSIIAMSMVLRHLSGKRDESAVGNSGGVGKDTSDLSRESDTKEVSEKREETTWNPLYYIRPSSDIVAENRTVPSEEPISEGPPLPIVMKGRIIVYTRLGCPECKEVRKFLYMKRLRYVEINIDVYPSRKMELEKKSGSTSIPKVFFNGILIGGLSKLKSLNESGKLNEKIDYLINEVPSFECPVPPLSGEDDVSSRGALDEMALIVRKMKECIVVQDRFFKMRRFTNCFIASDAVDFLSEDQYLERKEVYGLAVEFARKLASKLFFQHVFDENLFEDGNQLYRFLDDDPTVASFCHNIPRGIITVKPKPMTEVASRLRLLSYAMFEAYASEDGRHVDYRSMHGSEEFARYLRIIEELQRGEVWNLSREEKLAFFINLYNMMAIHAILVWGHPSGPLERRKLFGDFKYVIGGFTYSLSAIQNGILRGNQRQPYTLMKPFGAKDKRLRVALPFPEPLIHFALVYGTRSGPSLRCYSPGDIDKELMDAARNFLRSGGLSIDFTAKVAYASKILKWFSLDFGKNEVEVLKHVSSYLDPADSELLFDLLATSELKVIYQPYDWGLNC 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01278 833 MobiDBLite consensus disorder prediction 1 37 - -
Spst8g01278 833 Pfam Protein of unknown function, DUF547 635 761 IPR006869 -
Spst8g01278 833 SUPERFAMILY Thioredoxin-like 359 442 IPR036249 -
Spst8g01278 833 PRINTS Glutaredoxin signature 405 418 IPR014025 -
Spst8g01278 833 PRINTS Glutaredoxin signature 419 432 IPR014025 -
Spst8g01278 833 PRINTS Glutaredoxin signature 363 381 IPR014025 -
Spst8g01278 833 SUPERFAMILY "Winged helix" DNA-binding domain 473 565 IPR036390 -
Spst8g01278 833 MobiDBLite consensus disorder prediction 203 228 - -
Spst8g01278 833 MobiDBLite consensus disorder prediction 304 318 - -
Spst8g01278 833 MobiDBLite consensus disorder prediction 76 105 - -
Spst8g01278 833 Gene3D - 466 563 IPR036388 -
Spst8g01278 833 MobiDBLite consensus disorder prediction 212 228 - -
Spst8g01278 833 MobiDBLite consensus disorder prediction 137 166 - -
Spst8g01278 833 SMART DEP_3 479 557 IPR000591 GO:0035556
Spst8g01278 833 MobiDBLite consensus disorder prediction 39 57 - -
Spst8g01278 833 ProSiteProfiles Glutaredoxin domain profile. 351 448 - -
Spst8g01278 833 CDD DEP 476 554 - -
Spst8g01278 833 Gene3D Glutaredoxin 359 443 - -
Spst8g01278 833 MobiDBLite consensus disorder prediction 1 60 - -
Spst8g01278 833 MobiDBLite consensus disorder prediction 76 102 - -
Spst8g01278 833 MobiDBLite consensus disorder prediction 287 318 - -
Spst8g01278 833 Pfam Glutaredoxin 363 420 IPR002109 -
Spst8g01278 833 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 485 555 IPR000591 GO:0035556
Spst8g01278 833 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 23 833 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01278 Spst-Chr8 11897929 11904635 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01278 - - ccaj:109814814 1284.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01278 8 11897929 11904635 Spst8g01278 8 11897929 11904635 ECH
Spst8g01278 8 11897929 11904635 Spst9g01223 9 11568921 11572190 PCT