Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01220 ATGGGTGCATTTTTCAGTGTGGCGAGTACAAAATCTGACAAAAGGGAATGGAATGGGGTCTCTCCAAATGAGACATGTAAGAGGCAAAAAATGTCTCTTACTGTTGATGAAGAGAGTCCAAGGCTAATTCCTAATCTCCCTGATGAGTTATCACTTCAGATTATTGCTAGACTTCCTAGAATTTGTTACTTAAATGTAAGGATGGTATCAAAGAAGTGGAAGTCAACTATCATAAATTCAGAACTGTATAAAGTAAGGAAAGAACTTGGGACAACTGAAGAGTGGCTTTATCTATTGATTAAGGTTGGAGAAAATAATCTTCGATGGCATGCTCTAGATCCTCGTTCTAAGATATGGCAGAGAGTGCCTAATATGCCCAATTTTGCTAATGAAGAAGAACCTAGAAAAGGTTCTTCAAGGCTTTGGATGTGGAACATGGTGGAGAGTATCAGGATTGCTGAAGTTATTAGAGGCTTTCTTGGACAGAAGGATGCATTTGATGAAATGCCCTTTTGCGGTTGTGCAATTGGAGCTGTTGATGGATGTCTATATGTTCTTGGTGGATTTTCTAAGGCTTCAACTATGAGATGTGCGTGGCGATTTGATCCGATTCATAATACATGGAGCAAGGTGACTTCTATGTCCACGGGTCGGGCATACAGTAAGACAGGCATCTTAAATAACAAGCTTTATGTTGTTGGAGGGGTTAGTCAAGGTCAAGCTGGATTGGTTCCCCTCCAATCTGCTGAAGTTTTTGACCCCTCTACAGATACATGGTCGCATGTACCTAGTATGCCATTCTCTAGAGCTCAAGTCCTTCCCAGTGTTTTTTTGGCTGACATGTTAAAGCCTATTGCCACAGGGTTGACCTCATACATGGGGAAATTGTGTGTTCCACAGAGTCTGTATTCATGGCCCTTTTTTGTTGATGTTGGGGGAGAAATCTATGATCCTGAAACTAACTCGTGGATAGAAATGCCAGCTGGAATGGGTGAAGGCTGGCCTGCACGGCAGGCAGGTACCAAATTGAGTGTTGTAGTGGATGGTGAATTATATGCTTTTGACCCTTCTAATTCTATGGATAGTGGAAGGATCAAGGTATATGACCAACGTGAAGATGCTTGGAAAGTAGTTATTGGAAAAGTTCCTATATACGATTCTGCTGATTCAGAGTCTCCATATCTACTTGCTGGTTTCCATGGAAAGCTCCATGTCATTACAAAAGATGCCAATCATGATATTGCTGTTCTACAGGCAGGCTTGCGCAATAATTTGGATTCCTCATTATCACTCTCAACTCTGTCACAAAGTACACTGCATGAATCTCCAGAACTAGCTTCTGAATCAGATGCAGCAGTTGTTTGGAGGGTGATTGCCAGCAGGGATTTTGGGCAGGCCGAATTAGTCAGTTGCCAAGTTATTGACATATAG 1431 0.4186 MGAFFSVASTKSDKREWNGVSPNETCKRQKMSLTVDEESPRLIPNLPDELSLQIIARLPRICYLNVRMVSKKWKSTIINSELYKVRKELGTTEEWLYLLIKVGENNLRWHALDPRSKIWQRVPNMPNFANEEEPRKGSSRLWMWNMVESIRIAEVIRGFLGQKDAFDEMPFCGCAIGAVDGCLYVLGGFSKASTMRCAWRFDPIHNTWSKVTSMSTGRAYSKTGILNNKLYVVGGVSQGQAGLVPLQSAEVFDPSTDTWSHVPSMPFSRAQVLPSVFLADMLKPIATGLTSYMGKLCVPQSLYSWPFFVDVGGEIYDPETNSWIEMPAGMGEGWPARQAGTKLSVVVDGELYAFDPSNSMDSGRIKVYDQREDAWKVVIGKVPIYDSADSESPYLLAGFHGKLHVITKDANHDIAVLQAGLRNNLDSSLSLSTLSQSTLHESPELASESDAAVVWRVIASRDFGQAELVSCQVIDI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01220 476 MobiDBLite consensus disorder prediction 1 21 - -
Spst9g01220 476 ProSiteProfiles F-box domain profile. 40 86 IPR001810 GO:0005515
Spst9g01220 476 Gene3D - 102 385 IPR015915 GO:0005515
Spst9g01220 476 SMART kelc_smart 229 279 IPR006652 GO:0005515
Spst9g01220 476 SMART kelc_smart 182 228 IPR006652 GO:0005515
Spst9g01220 476 SUPERFAMILY Kelch motif 95 406 IPR015915 GO:0005515
Spst9g01220 476 SMART fbox_2 46 86 IPR001810 GO:0005515
Spst9g01220 476 Pfam Kelch motif 218 266 IPR006652 GO:0005515
Spst9g01220 476 Pfam Kelch motif 170 215 IPR006652 GO:0005515
Spst9g01220 476 PANTHER OS02G0202900 PROTEIN 27 475 IPR045887 -
Spst9g01220 476 Pfam F-box domain 44 82 IPR001810 GO:0005515
Spst9g01220 476 CDD F-box_AtAFR-like 42 86 - -
Spst9g01220 476 SUPERFAMILY F-box domain 30 86 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01220 Spst-Chr9 11531656 11533086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01220 36 264 Miscellaneous Gene Families AT4G33900 27.119 3.31e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01220 - - gmx:100806691 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01220 9 11531656 11533086 Spst9g01220 9 11531656 11533086 ECH
Spst8g01272 8 11822082 11823611 Spst9g01220 9 11531656 11533086 PCT