Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01202 ATGGCTGCTGAAGTATATTACCAGGCTATTGGCACTTTGCAGTCCCATTCTTATCTGGATAATTTTAATCATCACCAAAAACATAAAAGCAATTTAGTAAGATTGGTGACTAGGGATTTTATCAGTGGTAATGGCTTGTCAAGGAGAAGTAGTAGCTCTGTCCAGAGGAATTGTGCTGTAATTCAATCGCTAGCTTTTCAAACATCAGTAGTTGATCCGGTGTTGTCCCCTTCAAGAAGCAATGCTGGTGACAATTACAAGAAATCAAATGAAGCAGCTTTAATCCTTATTCGGCATGGTGAATCATTATGGAATGAGAAGAACTTATTCACAGGATGTGTTGATGTCCCTCTAAGCAAGAAGGGTATAGATGAAGCAATTGAAGCTGGAAAAAGAATTAGCAGCATTCCTGTTGATGTCATATTTACATCGGCTTTGATTCGTGCACAAATGACAGCCATGCTTGCTATGACCCAGCACCGTCATGGGAAGGTCCCTATCATTTTGCACAATGAGAGTGAACGAGCAAGGTCATGGAGTCAAGTTTTTAGTGAAGATACAACAAAACAGTCCATTCCAGTCATAGCAGCTTGGCAACTAAATGAAAGAATGTATGGGGAACTGCAGGGTCTTAATAAGCAAGAAACAGCAGACAGATATGGGAAAGAACAAGTCCATGAATGGCGGCGAAGTTATGACATACCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTCAAAGAGCAGTTGCCTATTTTAGAGACGAAATTGAACCACAACTTTTAGCTGGAAAGAATGTTATGATTTCAGCCCATGGGAATTCATTGAGATCCATTATCATGTACCTTGATAAATTAACTTCCCAAGAGGTCATTAGTTTGGAACTGTCAACTGGAATTCCCATGCTTTACATTTTCAAAGAGGGAAGATTCATTAGGAGGGGGAGTCCCATAGGGCCTTCTGAAGCTGGAGTTTATGCCTATACAAGGCGTCTGGCTCTTTACAAGCAGAAGTTGGATGACATGTTCCAATGA 1035 0.4068 MAAEVYYQAIGTLQSHSYLDNFNHHQKHKSNLVRLVTRDFISGNGLSRRSSSSVQRNCAVIQSLAFQTSVVDPVLSPSRSNAGDNYKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRHGKVPIILHNESERARSWSQVFSEDTTKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAQRAVAYFRDEIEPQLLAGKNVMISAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPSEAGVYAYTRRLALYKQKLDDMFQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01202 344 Pfam Histidine phosphatase superfamily (branch 1) 175 297 IPR013078 -
Spst9g01202 344 Pfam Histidine phosphatase superfamily (branch 1) 94 170 IPR013078 -
Spst9g01202 344 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 91 318 IPR005952 GO:0006096|GO:0016868
Spst9g01202 344 CDD HP_PGM_like 94 313 IPR013078 -
Spst9g01202 344 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 96 105 IPR001345 GO:0003824
Spst9g01202 344 SMART PGAM_5 93 279 IPR013078 -
Spst9g01202 344 Gene3D - 84 317 IPR029033 -
Spst9g01202 344 PANTHER PHOSPHOGLYCERATE MUTASE 84 330 IPR005952 GO:0006096|GO:0016868
Spst9g01202 344 SUPERFAMILY Phosphoglycerate mutase-like 94 310 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01202 Spst-Chr9 11216455 11219269 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01202 K01834 - gmx:100802621 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01202 9 11216455 11219269 Spst9g01202 9 11216455 11219269 ECH
Spst8g01256 8 11658758 11661140 Spst9g01202 9 11216455 11219269 PCT