Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01256 ATGGCTGCTGGAGTGTATAACCAAGCAATTGGGGCTTTTCAATCCCATTCTCTCGTCAACAATTTTAATCATCAGCAGAAGTTCAACAATATTGGAAGACTGGTGGTCACAAAGGATTTTATCAGCAGTAACTGTTTGTCAAGAAAGAATTTTAGTGTAATTCAATGTATAGCTTCTCAAACATCTGAGGTTGACACAGCATCATCCTCTTCAAGAAGCAAAACTAGTGCCAGAGACACTCACACAAAGTCAAATGAAGCAGCTTTGATCCTTGTTCGACACGGCGAGTCCTTGTGGAATGAAAAGAACTTGTTCACAGGTTGTGTTGATGTGCCTCTAAGCAAGAAGGGTATAGATGAGGCAATTGAAGCAGGCAAAAGAATTAGCAGTATTCCTGTAGATCTCATTTTTACATCTGCTTTAATTCGAGCACAAATGACAGCCATGCTTGCCATGACACAGCACCGCCGCAGGAAGGTGCCCATCATAGTGCACAATGAGAGTGAACAAGCAAGGGAATGGAGTCAAATTTTTGGTGAAGATACAAGAAAGCATTCCATTCCAGTCATAACAGCTTGGCAATTGAATGAAAGAATGTATGGGGGACTACAGGGTCTCAATAAGCTACAAACAGCAGAAAGGTATGGGAAGGAAAAAGTACATGAGTGGCGTCGAAGTTATAGCATACCTCCCCCAAATGGTGAAAGTTTGGAAATGTGTGCTGAAAGGGCAGTTGCATATTTTAGAGACCAAATTGAACCTCAACTCTTATCTGGAAAGAATATTATGATTTCAGCTCATGGGAATTCACTGAGATCCATTATTATGTATCTTGACAAACTAACTTCCCAAGAGGTGATTAGTTTAGAATTGTCAACTGGAATTCCAATGCTTTATATTTTCAAAGAAGGAAGATTCATTAGGAGGGGGAGTCCAATAGGACCAACCGAAGCTGGAGTTTATGCCTACACTAGGCGTTTGGCTCTTTACCGGCAGAGGTTGGACGATGTGCTTCAATAA 1020 0.4108 MAAGVYNQAIGAFQSHSLVNNFNHQQKFNNIGRLVVTKDFISSNCLSRKNFSVIQCIASQTSEVDTASSSSRSKTSARDTHTKSNEAALILVRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDLIFTSALIRAQMTAMLAMTQHRRRKVPIIVHNESEQAREWSQIFGEDTRKHSIPVITAWQLNERMYGGLQGLNKLQTAERYGKEKVHEWRRSYSIPPPNGESLEMCAERAVAYFRDQIEPQLLSGKNIMISAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPTEAGVYAYTRRLALYRQRLDDVLQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01256 339 Gene3D - 78 312 IPR029033 -
Spst8g01256 339 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 91 100 IPR001345 GO:0003824
Spst8g01256 339 SMART PGAM_5 88 274 IPR013078 -
Spst8g01256 339 Pfam Histidine phosphatase superfamily (branch 1) 89 165 IPR013078 -
Spst8g01256 339 Pfam Histidine phosphatase superfamily (branch 1) 179 292 IPR013078 -
Spst8g01256 339 SUPERFAMILY Phosphoglycerate mutase-like 89 305 IPR029033 -
Spst8g01256 339 PANTHER PHOSPHOGLYCERATE MUTASE 77 325 IPR005952 GO:0006096|GO:0016868
Spst8g01256 339 CDD HP_PGM_like 89 308 IPR013078 -
Spst8g01256 339 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 86 313 IPR005952 GO:0006096|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01256 Spst-Chr8 11658758 11661140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01256 K01834 - gmx:100784422 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01256 8 11658758 11661140 Spst8g01256 8 11658758 11661140 ECH
Spst8g01256 8 11658758 11661140 Spst9g01202 9 11216455 11219269 PCT