Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01200 ATGAGTGAGGATCAGAAAAGAACTGCCTCCAACGATCATGATAGAGTGGCAATATCACAAGAACAACAGGCCAAGATCACTGAGGTGAGAGGGTTGATAGGGCAGTTATCAGATAAGGAATCTGTGTACTGTTCTGATGCCTCCATTTCAAGGTATTTAAGGTCAAGAAATTGGAATGTTAAGAAGGCATCTCAAATGTTGAAACAAAGCCTGAAATGGAGAAAAGAATACAAACCGGAAGAGATCGGCTGGGAAGAGGTTGCAAATGAAGCAGAGTCAGGGTCGATGTATAGACCAAATTATAATGACAAGTACGGGAGACCAGTGATTGTAATGAGACCTAGTCGCAAGAACTCCAAATCAACACAGGGACTGATTAAGTATTTAGTATACTGCATGGAGAATGCCATTTTTAATCTTCCACCACACCAGGAACAGATGACGTGGCTGGTAGATTTCGAGGGTAAGATGTCAGATATGTCGTTCAAATTGGCACGTGAAACTGTCCATGTATTACAAAACTATTATCCAAAGCGCATGGGTTTGGTAATTCTGTACAATGCACCTATACTCTTCCAACCATTCTTCAAGATGCTAAGGCCCTTTGTGGAGACTGAAATTTATAATAAAATAAAGTTTCGGTATTCGGACGGCCACCGCGAAAAAGAGATTATGGAGGATTTGTTTGATATGGATAAACTTGAATCTGCATTTGGTGGGAATGGTGGCACAGGATTTGACATAAATAAATATGCTGAGAGAATGAAAGAGGATGACAACAAGATTCTGTCTTTCTGGACACAGGTCAAGCCTGTGTCATAA 822 0.4063 MSEDQKRTASNDHDRVAISQEQQAKITEVRGLIGQLSDKESVYCSDASISRYLRSRNWNVKKASQMLKQSLKWRKEYKPEEIGWEEVANEAESGSMYRPNYNDKYGRPVIVMRPSRKNSKSTQGLIKYLVYCMENAIFNLPPHQEQMTWLVDFEGKMSDMSFKLARETVHVLQNYYPKRMGLVILYNAPILFQPFFKMLRPFVETEIYNKIKFRYSDGHREKEIMEDLFDMDKLESAFGGNGGTGFDINKYAERMKEDDNKILSFWTQVKPVS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01200 273 SMART sec14_4 90 243 IPR001251 -
Spst9g01200 273 FunFam Phosphatidylinositol transfer protein 3 5 273 - -
Spst9g01200 273 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Spst9g01200 273 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 240 IPR001251 -
Spst9g01200 273 CDD SEC14 92 241 IPR001251 -
Spst9g01200 273 SUPERFAMILY CRAL/TRIO domain 84 260 IPR036865 -
Spst9g01200 273 Gene3D - 2 270 IPR036865 -
Spst9g01200 273 Pfam CRAL/TRIO domain 97 240 IPR001251 -
Spst9g01200 273 Pfam CRAL/TRIO, N-terminal domain 25 68 IPR011074 -
Spst9g01200 273 SUPERFAMILY CRAL/TRIO N-terminal domain 18 86 IPR036273 -
Spst9g01200 273 PANTHER GH16843P 8 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01200 Spst-Chr9 11207476 11209174 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01200 K26544 - gmx:100802091 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01255 8 11652883 11655354 Spst9g01200 9 11207476 11209174 PCT