Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01255 ATGAGTGTGGAGCCAAAGAAAATGGCCTCTTACGGCCAGGAGAAAATGTTAACATCACCAGAACAGCAGGCATTGATCAATGAGGTGAGAAGGTTAATTGGGCCACAGTCTGGTAAGGCATCCATTTTTTGTTCTGATGCCTGCATCTCGAGGTATTTAAGGGCTCGGAATTGGAATGTCAAGAAAGCAGCTAAAATGTTGAAACTGACCCTCAAATGGAGAGAAGAAAACAAACCGGAAGAAATCCGTTGGGAAGATGTTGCTCATGAAGCAGAGACAGGAAAAATATACAGATCCAATTATATTGACAAGCAAGGGCGAACTGTCCTAGTAATGAGACCTGGTCGACAGAACTCAAAGTCAACTAAAGGACAAATTAAATATTTGGTATACTGCATGGAGAATGCTATTGTTAATCTTCCACCAGAACAAGAACAAATGGTCTGGTTGATTGATTTCCAGGGTTTCAATATGTCACATATATCAATCAAGGTTACGCGTGAAACTGCCCATGTATTACAAGAACATTATCCTGAACGCCTGGGTCTTGCAATACTTTACAACGCACCTAAGTTCTTTGAGCCATTTTTCATGATGGTAAAGCCGATATTAGAGCTTAAGACTTATAATAAAGTCAAGTTCGCATACTCTGACGATCAGAACACCAAGAAGATTATGGAGGATTTGTTTGATTTTGACCAACTTGAATCTGCATTTGGTGGAAAAGATGATACAGGATTTGACATAAATAAATATGCTGATAGAATGAAAGAGGATGACAAGAAGATTCCTGCTTTCTGGAGTAGGGAAAACTCTCCATCATCAGTTCCAAATCATGTTCCTTCTTTAGATTCTACTAGGTTAGAGTCAGATACTGATGCTTCGGACAATGAGAAACTAAACTCTTCCCCTGACCCCGAGGTGGACACAGGTATCATTAACCCGGGCCAGAAAAGCTTGGTTAATGAAGGAGAAAGAAATATCAGTGCAGATTAA 996 0.3996 MSVEPKKMASYGQEKMLTSPEQQALINEVRRLIGPQSGKASIFCSDACISRYLRARNWNVKKAAKMLKLTLKWREENKPEEIRWEDVAHEAETGKIYRSNYIDKQGRTVLVMRPGRQNSKSTKGQIKYLVYCMENAIVNLPPEQEQMVWLIDFQGFNMSHISIKVTRETAHVLQEHYPERLGLAILYNAPKFFEPFFMMVKPILELKTYNKVKFAYSDDQNTKKIMEDLFDFDQLESAFGGKDDTGFDINKYADRMKEDDKKIPAFWSRENSPSSVPNHVPSLDSTRLESDTDASDNEKLNSSPDPEVDTGIINPGQKSLVNEGERNISAD 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01255 331 MobiDBLite consensus disorder prediction 268 288 - -
Spst8g01255 331 MobiDBLite consensus disorder prediction 315 331 - -
Spst8g01255 331 SUPERFAMILY CRAL/TRIO N-terminal domain 18 86 IPR036273 -
Spst8g01255 331 SMART CRAL_TRIO_N_2 45 70 IPR011074 -
Spst8g01255 331 MobiDBLite consensus disorder prediction 267 331 - -
Spst8g01255 331 SUPERFAMILY CRAL/TRIO domain 84 262 IPR036865 -
Spst8g01255 331 Pfam CRAL/TRIO, N-terminal domain 45 68 IPR011074 -
Spst8g01255 331 MobiDBLite consensus disorder prediction 289 303 - -
Spst8g01255 331 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 84 247 IPR001251 -
Spst8g01255 331 Gene3D - 2 271 IPR036865 -
Spst8g01255 331 Pfam CRAL/TRIO domain 93 241 IPR001251 -
Spst8g01255 331 FunFam Phosphatidylinositol transfer protein 3 5 276 - -
Spst8g01255 331 CDD SEC14 92 242 IPR001251 -
Spst8g01255 331 PANTHER GH16843P 6 273 - -
Spst8g01255 331 SMART sec14_4 90 244 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01255 Spst-Chr8 11652883 11655354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01255 49 212 Acyl Lipid Metabolism Gene Families AT5G47730 27.473 7.71e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01255 K26544 - gmx:100780151 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01255 8 11652883 11655354 Spst8g01255 8 11652883 11655354 ECH
Spst8g01255 8 11652883 11655354 Spst9g01200 9 11207476 11209174 PCT