Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01146 ATGTCTTTGGAATTGCTCCTTGCTTTGCTTCTTGATTTTGCCCAGGAGTGCAAAAGGCTAAGTGTGGGGGAATTTGATGACTATGTATCCAACAGAATGAAGGGACAACAAATGTATATGGTCAAAGCTAATGTGTTGTCCAAAAGGTTGAATGGCGGCGTGAATGAAGGCGAGAGGGTTGATGGTGATTTTAAATTCGCAGGCTGCGATGATGATGAGCATGGAATATTTAAATGCAGAAGAATGGCTGTATGGAATTACAGGGGTAGTAATAATAATAAGATAAAAAGAAGGAGAAATAGGGAAAAGCGAGGAGTGGAAGGTGGCAACGACGTTGAGAAAAAGCCAAAAGCGAACAGCAACAGAGCACCGCTTTTTTATTCGTCACTGCAAACCAAAACCATGAAGAAGAAGAATCCAACACTCCGAGAGAAAACAGGACCAATGCAGCAGAAGCGTAGGACGGTTCCACTCGGCATGCTCAGAAGGTTTATCGCCGCCTCAATATTCTCCTTAGTTGTCACTTCTTTCTTCTTTGTTCACGTTCACGTTTCTCCTTCACCCACTGATCACAAGTTCAATGACAAGATCCCCTCGTTTTATGACCCGCAAAGCTGGACTCTAGAACTCGCTCCGCCCTATCTGTTCAAGACTCCTCTCTCTGTTCCCAAGTTGAAGGATTCAAGTAAGGAGTCAGACTACGAGAAACTGTGGAAGCCTCCACCAAATTATGGGTTTATAACCTGTACAAAGCCTACTCCTAATTACAAAACTCCTACAAGTTCAGGTGGTTACCTTTCAGTTCATACAAATGGAGGGCTAAACCAAATGCGTAATGGGATATGTGATATGGTAGCTATAGCCCGTATCATAAATGCTACTCTTGTAATTCCAGAACTTGATAAAAAGTCATTTTGGCATGACACTAGCAATTTCTCGGATATCTTTGATGATGAGTGGTTTATTAGTTCTCTAGCTAATGATATAAAGATCATTAAGAAGCTTCCCAAGAAACTGGTTAATGCAACCAAAATGGTCATGCAATTCAAAAGCTGGTCTGGTATGGATTACTACGAGAAAGAGATTGCTGCCTTGTGGACTAAATTCAATGTAATTCGAACTTCCAAATCTGATTCTCGCTTAGCAAATAACAATCTACCACCAGATATTCAGAAGCTTCGCTGCCGTGCTTGTTATGAAGCTCTTCGTTTCTCTCCTCGTATTGAACAAATGGGAAAAATATTGGTGGAGAGGATGAGGTCATTCGGCCCCTATATTTCATTACATTTACGTTATGAGAAGGACATGCTTGCATTTAGTGGGTGCACACATGGATTATCTACGGCGGAGTCTGAAGAGCTAAGGCGTATCAGAGAGAATACTACTTACTGGAAAAGAAAATACATTAATCCCAGAGAAGAGAGGTCCAAAGGGTTTTGCCCCTTGACTCCAAAGGAAGTTGGAATTTTTCTTACTGCTCTTGGTTACCCATCAAAGACTCCAATATATATTGCGGCTGGGGAGATATATGGGGGTGAGTTCCATATGACTGACTTGCGATCCCGCTATCCACTGTTAATGAGCAAGGAAAAGTTGGCATCCATTGGGGAGCTTGAACACTTTTCTAGTCATGCGTCTCAAATGGCTGCTCTGGACTATATTGTTTCGGTTGAAAGTGACGTGTTTGTACATTCTTACCCTGGAAACATGGCGAAGGCTGTTGAAGGCCATCGTCGTGTTCTGGGGAGAGGAAGAACAATATCTCCTGACAGGAAAGCCCTTGTTCGTCTGTTTGATAAACTGCAAAATGGGTCAATGACCGAGGGAAAAAGACTGTCTAATAAAGTTATCGATCTCCACAAAAGACGGCTTGGCTTCTTTAGAAAGAGAAAAGGTCCCGTTTCCGGAACAAAGGGCTTGGACAGGTTTCGTTCAGAAGAAACATTTTATGCAAACCCTTTACCTGATTGTTTATGTCGGACAGAATCACTCTCTATAAACGCTTCTCGGTATAGGTAG 2019 0.423 MSLELLLALLLDFAQECKRLSVGEFDDYVSNRMKGQQMYMVKANVLSKRLNGGVNEGERVDGDFKFAGCDDDEHGIFKCRRMAVWNYRGSNNNKIKRRRNREKRGVEGGNDVEKKPKANSNRAPLFYSSLQTKTMKKKNPTLREKTGPMQQKRRTVPLGMLRRFIAASIFSLVVTSFFFVHVHVSPSPTDHKFNDKIPSFYDPQSWTLELAPPYLFKTPLSVPKLKDSSKESDYEKLWKPPPNYGFITCTKPTPNYKTPTSSGGYLSVHTNGGLNQMRNGICDMVAIARIINATLVIPELDKKSFWHDTSNFSDIFDDEWFISSLANDIKIIKKLPKKLVNATKMVMQFKSWSGMDYYEKEIAALWTKFNVIRTSKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEQMGKILVERMRSFGPYISLHLRYEKDMLAFSGCTHGLSTAESEELRRIRENTTYWKRKYINPREERSKGFCPLTPKEVGIFLTALGYPSKTPIYIAAGEIYGGEFHMTDLRSRYPLLMSKEKLASIGELEHFSSHASQMAALDYIVSVESDVFVHSYPGNMAKAVEGHRRVLGRGRTISPDRKALVRLFDKLQNGSMTEGKRLSNKVIDLHKRRLGFFRKRKGPVSGTKGLDRFRSEETFYANPLPDCLCRTESLSINASRYR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01146 672 MobiDBLite consensus disorder prediction 102 118 - -
Spst9g01146 672 PANTHER OS02G0726500 PROTEIN-RELATED 162 660 - -
Spst9g01146 672 CDD O-FucT_plant 265 586 IPR024709 -
Spst9g01146 672 MobiDBLite consensus disorder prediction 94 119 - -
Spst9g01146 672 Pfam GDP-fucose protein O-fucosyltransferase 265 580 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01146 Spst-Chr9 10517275 10529265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01146 209 662 Miscellaneous Gene Families AT1G22460 65.198 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01146 - - gmx:100807411 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01146 9 10517275 10529265 Spst9g01146 9 10517275 10529265 ECH
Spst8g01202 8 11035158 11039788 Spst9g01146 9 10517275 10529265 PCT