Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01202 ATGCAGAGGCGTAAGTGGATTCCGTTGGCGCTGCTGAGAAAGTTGCTCATTGCAGCCATATGCTCCATAGCGTTTGTGGCTCTCTTCTCTGTGCGTATACACATTGTTCCTTCCTCTAAGGATCACAGGTTCAACGACAAGATCTCCACGGCCCAGGATCTGCAGAGCTGGACGCGAGAGCTCGCGCCACCTCATTTGTCCAAAGCTCCACTTTCTACTCCCAAGTTGAATGGTACAAGAGGGTACTTAGAATACCAGAAGCTGTGGAAGCCTCCATCAAATCGTGGGTTTTTGCCCTGTACAAAACCCACACCTAATTACACCACTCCTGCGGAATCGCGAGGATATCTCTTAGTCCATACAAATGGCGGGCTCAACCAAATGCGTTCTGGGATATGTGATATGGTAGCAGTGGCTCGTATCATAAATGCCACTCTTGTAATTCCAGAACTTGATAAAAGATCATTTTGGCAAGATACTAGCAATTTCTCTGATGTTTTTGATGAAGAGCATTTTATTAATTCTCTAGCTAATGATGTAAAAATCATTAAGAAGCTCCCTATAGAACTGGTTAATGAAACCAGAGTGGTCAAGCAATTCATAAGCTGGTCTGGCATGGATTACTACGAGAATGAGATTGCTAGCTTGTGGGAAGATTACCAAGTTATTCGAGCTTCCAAATCTGATTCACGATTAGCAAACAACAATCTACCTCCAGACATTCAGAAGCTACGCTGCCGGGCTTGTTATGAAGCACTTCGCTTCTCTCCTCACATTGAACAATTGGGAAAATTGTTGGTGGAGAGGATGAGGTCATTTGGTCCTTACATTGCGCTGCATTTGCGTTATGAGAAGGATATGCTTGCATTTAGTGGGTGCACCCATGATTTATCTCTTCTTGAAGCTGAAGAGCTACAGATGATCAGAGAGAACATTTCCTATTGGAAAATAAAGGAGATTGATCCAATAGAACAAAGGTCCAAAGGGCTTTGCCCCTTAACTCCAAAGGAAGTTGGGATTTTTCTTACTGCCCTTGGATACCCATCAACAACTCCGATATATATTGCTGCTGGTGAGATATATGGGGGAGAGTCCCACATGGCTGAATTGCGATCACGATATCCATTGTTGATGAGCAAGGAAAAGTTGGCATCCATAGAAGAGCTTGAACCTTTTGCTAATCATGCATCCCAAATGGCCGCTCTTGACTATATTGTATCTATTGAAAGTGATGTATTTATTCCTTCTTATTCTGGAAACATGGCAAAGGCTGTTGAGGGTCATCGTCGTTTTCTTGGACGTGGAAGAACAATATCTCCAGACAAGAAAGCCCTCGTTCGCCTGTTTGATAAACTGGATCAAGGTATATTGACCGAGGGGAAGAAACTATCAAATAGGATTATTGATCTCCACAGAAGAAGACTTGGCTCTCCCAGAAAGAGAAAAGGGCCAATTTCTGGAACAAAGGGCATGGAAAGATTCCGTTCAGAAGAAACTTTTTATTCTAATCCCTTGCCTGATTGTTTATGCCGGACAGAACCACTACCTCTAAACATCTCTAACACAGTTTGA 1572 0.4313 MQRRKWIPLALLRKLLIAAICSIAFVALFSVRIHIVPSSKDHRFNDKISTAQDLQSWTRELAPPHLSKAPLSTPKLNGTRGYLEYQKLWKPPSNRGFLPCTKPTPNYTTPAESRGYLLVHTNGGLNQMRSGICDMVAVARIINATLVIPELDKRSFWQDTSNFSDVFDEEHFINSLANDVKIIKKLPIELVNETRVVKQFISWSGMDYYENEIASLWEDYQVIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPHIEQLGKLLVERMRSFGPYIALHLRYEKDMLAFSGCTHDLSLLEAEELQMIRENISYWKIKEIDPIEQRSKGLCPLTPKEVGIFLTALGYPSTTPIYIAAGEIYGGESHMAELRSRYPLLMSKEKLASIEELEPFANHASQMAALDYIVSIESDVFIPSYSGNMAKAVEGHRRFLGRGRTISPDKKALVRLFDKLDQGILTEGKKLSNRIIDLHRRRLGSPRKRKGPISGTKGMERFRSEETFYSNPLPDCLCRTEPLPLNISNTV 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01202 523 PANTHER OS02G0726500 PROTEIN-RELATED 14 511 - -
Spst8g01202 523 Pfam GDP-fucose protein O-fucosyltransferase 116 431 IPR019378 -
Spst8g01202 523 PIRSF UCP009360 1 514 IPR024709 -
Spst8g01202 523 CDD O-FucT_plant 116 437 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01202 Spst-Chr8 11035158 11039788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01202 60 514 Miscellaneous Gene Families AT1G22460 70.769 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01202 - - gmx:100795727 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01202 8 11035158 11039788 Spst8g01202 8 11035158 11039788 ECH
Spst8g01202 8 11035158 11039788 Spst9g01146 9 10517275 10529265 PCT