Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01140 ATGGCATTCTCTGGTGCTTTGGTTTTGGCCTCATTGATTGCAATCAGCATGGCCCTGCCAACCCTCGCAACCGTCTACACCGTGGGAGATTCTTCAGGTTGGGCGATTGGTGCAGATTATAGTTCATGGACTGGTGGCAAGACCTTCTATGTGGGTGATACTGTGGTGTTCAACTATGGAGCTGGACACACAGTGGATGAAGTTAAAGAGAGTGACTACAAATCCTGCACCGCAGGGAATTCAATCAGTACAGACAGTAGTGGTGCAACCAAAATTACCCTCAAGACTGCAGGCAATCATTACTTCATATGTTCTGTTCCTGGACATTGCTCTGGTGGCATGAAACTTGCCCTCACTGTCAAAGCAGGAAAAGACACCACTCCTTCAACTGGGAAGGCTTCACCTTCTGACGACGGCACCGCCACCACAGCCACACCAACCACCACCACCACCACCACTGCAACTAAATCAAACTCGGCTTCAACGAGTATTGTGACATCAACTGTTGCCATGTTGATTGTTTCATGGATCACTCACTATGCCTTGCGCCTGGTATAA 558 0.4875 MAFSGALVLASLIAISMALPTLATVYTVGDSSGWAIGADYSSWTGGKTFYVGDTVVFNYGAGHTVDEVKESDYKSCTAGNSISTDSSGATKITLKTAGNHYFICSVPGHCSGGMKLALTVKAGKDTTPSTGKASPSDDGTATTATPTTTTTTTATKSNSASTSIVTSTVAMLIVSWITHYALRLV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01140 185 Gene3D - 22 127 IPR008972 -
Spst9g01140 185 CDD Phytocyanin 24 120 - -
Spst9g01140 185 PANTHER BLUE COPPER PROTEIN 23 152 IPR039391 GO:0009055
Spst9g01140 185 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Spst9g01140 185 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Spst9g01140 185 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Spst9g01140 185 FunFam Blue copper 22 126 - -
Spst9g01140 185 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Spst9g01140 185 MobiDBLite consensus disorder prediction 125 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01140 Spst-Chr9 10451395 10452064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g01140 34 184 Miscellaneous Gene Families AT1G22480 49.057 8.54e-39 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01140 - - gmx:100306522 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01140 9 10451395 10452064 Spst9g01140 9 10451395 10452064 ECH
Spst8g01199 8 10984131 10984932 Spst9g01140 9 10451395 10452064 PCT