Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01199 ATGGCTTCTTCTGTAGCATTAGTTTTTGGTGTATGTCTAGCACTCAACATGGCCATGCCAACACTTGCAGCTACCCACACAGTGGGAGACACCTCAGGTTGGACAATTGGTGGGGATTACAGCACATGGGCTAGTGGATTGAAATTTAGAGTCGGAGATAGTCTTGTTTTCAATTATGGACCTGGTCACACTGTGGATGAAGTGAAAGAAAGCGATTACAAGAGCTGCACTACAGGAAATTCTCTGAGCACAGACAGTAGCGGCGCCACCACCATTACCCTGAAGACTGCTGGCACTCATTACTTCATATGTGCTGCTCCTGGCCATTGCCAGGGTGGCATGAAGCTTGCTGTTAAGGTTAAGGCTAAAAAGACCTCTGCTTCTGCTGCAGCACCTTCACCTGCTAAGGACTCTGATGACACCAAAGACACACCCACTACTTCCACCACCACCTCTACAACTCCAACCTCTGCCAACCCTTCTACCTCCAGCTCCTCCACCTCCACCACCACAGCATCTTCTCATACATCTTCAGCAACACGTGGCACACCAATTATGTTTATTGTTTGTTGGATCTCATACTTGGTGTTGCGTTTGGTGTGA 603 0.4826 MASSVALVFGVCLALNMAMPTLAATHTVGDTSGWTIGGDYSTWASGLKFRVGDSLVFNYGPGHTVDEVKESDYKSCTTGNSLSTDSSGATTITLKTAGTHYFICAAPGHCQGGMKLAVKVKAKKTSASAAAPSPAKDSDDTKDTPTTSTTTSTTPTSANPSTSSSSTSTTTASSHTSSATRGTPIMFIVCWISYLVLRLV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01199 200 MobiDBLite consensus disorder prediction 144 179 - -
Spst8g01199 200 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Spst8g01199 200 PANTHER BLUE COPPER PROTEIN 22 140 IPR039391 GO:0009055
Spst8g01199 200 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Spst8g01199 200 CDD Phytocyanin 24 114 - -
Spst8g01199 200 FunFam Blue copper 22 126 - -
Spst8g01199 200 Gene3D - 22 127 IPR008972 -
Spst8g01199 200 MobiDBLite consensus disorder prediction 127 179 - -
Spst8g01199 200 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Spst8g01199 200 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01199 Spst-Chr8 10984131 10984932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01199 12 129 Miscellaneous Gene Families AT1G22480 53.390 3.92e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01199 - - gmx:100305666 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01199 8 10984131 10984932 Spst8g01199 8 10984131 10984932 ECH
Spst8g01199 8 10984131 10984932 Spst9g01140 9 10451395 10452064 PCT