Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g01134 ATGGCCCAGCAAAAGCGGTTAAGAAATTTGGCCCAAAACCTCAAAGACAAAGCTTCGGTCATCGCCGCGGTGCTATCCCCCAAGCGCCACGTGTCATCCGTCCGCGTGCACGTGCTCCGCGCCACCACGCACGCCCTCACCGCGCCTCCCTCTGAAGAAACCATCGCCGCCGTCCTCGCGGTGGGGGAGGGCTCCCACCGCCACCCGCGCGCCTGCATCGACGCGCTCATGGATCGCCTGCACCACACACGCAGCGCCACCGTGGCGCTCAAGTGCCTCTTCACGCTCCACAACGTCGTCGTAAAGGGACCCTTCACGTTGAAGGACCAACTCTCGTGTTACCCTTCTTACGGCGGCCACAACTTTCTTAACCTCTCCACCTTTCGCGACGACTCGGACGTAGAGTCGGTGGAACTTAGTTCTTGGGTGCGGTGGTACGCCGGCGTGTTGGAACAGAGCCTAACGGTTTCCAGAGTCTTGGGGTATTACCTCAACGCCTCTAGCGAAACCCAAGAAAGGAAAAAGATTCTCGTTTCGAACGCGTCGAATGCGGATTTGTTGTACAAGGTGGAGGCACTCGTGGGTTTCGTCGAACAAATAAGCCACGTCCCTGATTCGTTGCACCTGCAGAGGAACGAGTTGGTGTACGAGGTTGTGCGGTTGGTGGGCGAGAATTATAGGAGCGTGCAGGTTGAGATTTTGTTGCGCGTGGATGAACTTGGGGAGAGAATGGAGGATTTTGAGGTGGGTGAGTTGAACGAGTTGGTGGGTTATTTAGGGCGATTAGAGGAGAGTCTCGAAAAGTTGATTCTTTTGTTCGTGAATAGGAGAAGGAACAATGGGTTTTGGGATTTGGTTGAGAAGACGAAGGAGAAGGGAATGGCGAAGAAGAAGGAGATTGAAGGGAAGTGGCTCACGGTGGTTGTTAACGCCGGCGCCGCCGAGTTGCCTCGGTCCACTAACCCGTTTCTTGACCCGGGGCAACTCAGTCCGGTCCCACGGATAGATTTTGCAACGGTAAGGTGA 1026 0.5575 MAQQKRLRNLAQNLKDKASVIAAVLSPKRHVSSVRVHVLRATTHALTAPPSEETIAAVLAVGEGSHRHPRACIDALMDRLHHTRSATVALKCLFTLHNVVVKGPFTLKDQLSCYPSYGGHNFLNLSTFRDDSDVESVELSSWVRWYAGVLEQSLTVSRVLGYYLNASSETQERKKILVSNASNADLLYKVEALVGFVEQISHVPDSLHLQRNELVYEVVRLVGENYRSVQVEILLRVDELGERMEDFEVGELNELVGYLGRLEESLEKLILLFVNRRRNNGFWDLVEKTKEKGMAKKKEIEGKWLTVVVNAGAAELPRSTNPFLDPGQLSPVPRIDFATVR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g01134 341 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 300 IPR045192 GO:0048268|GO:0072583
Spst9g01134 341 SMART enth_2 32 164 IPR013809 -
Spst9g01134 341 SUPERFAMILY ENTH/VHS domain 34 161 IPR008942 -
Spst9g01134 341 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Spst9g01134 341 FunFam Putative clathrin assembly protein At4g40080 6 163 - -
Spst9g01134 341 Pfam ANTH domain 35 199 IPR011417 GO:0005543
Spst9g01134 341 CDD ANTH_N_AP180_plant 35 157 - -
Spst9g01134 341 Gene3D - 5 163 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g01134 Spst-Chr9 10388043 10389068 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g01134 - - gmx:100788852 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g01134 9 10388043 10389068 Spst9g01134 9 10388043 10389068 ECH
Spst8g01187 8 10856242 10857357 Spst9g01134 9 10388043 10389068 PCT