Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00865 ATGGCGAATGATAAAGTGATTGGTGAGGGTGATATTGGTGGTACGAGTCCCTCCGGGGGTGGGAAGAAGAAACGCAAAGGTTTCTTGTCGCGAATTTGGAACGGGATATTTAGGTTACACGGTGATGATTTCGAGAAGAGACTCCAATACATTTCTAAAGAGGAGGCTCAGGTTATGACTAGGATGAACAGCAGATCGCGATCCTTGAGGAGAATTTCCCGCCATCTTATTATGTTGTCTGTCATATTTGAGGTTGTTGCTGTAGTTTATGCTATTATGACAACAAGATCAATTGACTTGAATTGGAAAATGAGAGCAATCCGGGTTTTGCCAATGTTTCTTTTGCCTGCAGTGGCATCTGTTGCCTATACTGCATTTATCAGCTTCACAAGGATGTGTGATCGCAGGGACCAGAAAATTCTTGAAAGGCTGCGAGCTGAAAGACAAGAAAAAATTGATGAGCTCAAAGAAAAGACAAATTATTACACTACACAACAGCTCATTCAGAGATATGATCCAGACCCAGCTGCAAAAGCGGCTGCTGCAACTATTTTAGCATCTAAGTTGGGTGCAGATTCTGGTTTGAGAGTGTATGTGGAAGATGAGCACAATTCCAGCACTCCAATAGGGAAGAGCTATGATGTTGAACTTGTGCAGTCCTCTGGACTTCGAAATAGGAGACAAATTCAATCTAGAAGCATTAGTCCGCGGGCAACCACACCACATCCTGGTGATCAACAAGTTGGTCCTGGGGGAAGTGATCAAACTCAGACTTTTGAGGACAATCAGCTTGTTGTTGTTGAACATCACCAACCTCAAAGTTCAAGCACACAAGATGCTGGATGGATTGCACGAATTGCAGCTTTGCTTGTGGGTGAGGATCCGGCACAGTCGTATGCTCTCATATGTGGTAACTGCTATATGCATAATGGTTTAGCCCGTAAGGAGGATTTCCCATTTATCACATACTACTGCCCACATTGTCATGCCCTTAACAAACCGAAGCAATTGGATGAGCGTATATCTGGTCTTACTTCTCCAAACACAGGGACTCCAAATACGGTCAATAGTGTGACTGATGCAGTTAAGAATGTTAGGGCATCTGCAGCTGAGAGTATAATCACAGGCAGTAGTCCTGGAAGTGCTTCAAGCTCTGAGATTGGGGAAGTACCAGAAAGGGCATGTGTGGATGAGAAAGTTGATTAA 1206 0.4386 MANDKVIGEGDIGGTSPSGGGKKKRKGFLSRIWNGIFRLHGDDFEKRLQYISKEEAQVMTRMNSRSRSLRRISRHLIMLSVIFEVVAVVYAIMTTRSIDLNWKMRAIRVLPMFLLPAVASVAYTAFISFTRMCDRRDQKILERLRAERQEKIDELKEKTNYYTTQQLIQRYDPDPAAKAAAATILASKLGADSGLRVYVEDEHNSSTPIGKSYDVELVQSSGLRNRRQIQSRSISPRATTPHPGDQQVGPGGSDQTQTFEDNQLVVVEHHQPQSSSTQDAGWIARIAALLVGEDPAQSYALICGNCYMHNGLARKEDFPFITYYCPHCHALNKPKQLDERISGLTSPNTGTPNTVNSVTDAVKNVRASAAESIITGSSPGSASSSEIGEVPERACVDEKVD 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00865 401 Coils Coil 138 161 - -
Spst9g00865 401 MobiDBLite consensus disorder prediction 225 242 - -
Spst9g00865 401 MobiDBLite consensus disorder prediction 373 401 - -
Spst9g00865 401 MobiDBLite consensus disorder prediction 225 257 - -
Spst9g00865 401 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 22 383 IPR040115 GO:0071786
Spst9g00865 401 MobiDBLite consensus disorder prediction 1 25 - -
Spst9g00865 401 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 282 332 IPR019273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00865 Spst-Chr9 7593541 7596775 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00865 K23292 - gmx:100816305 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01643 8 19101496 19106184 Spst9g00865 9 7593541 7596775 PCT