Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01643 ATGGGTGATGAGAAAGGTGAGAAGAAAGAAACCAGTGTGGTGAACGAGAATATTGAGAACAATGACGAGAAGACGAAGAAACCGAACAAGAAGGGGTTTATTTCGCGAATATGGAACGCGATGTTCAGGTCCAAACGCGACGATTTTGAGAAGAGGCTTCAGTGTATCACCAAAGAAGAAAACGCCGTCGTTGCGAGAATGAGCACTAGATCTCGCACTTGGAGGCGAACCTCTCGCCAGCTTATTTTATTCTCCGTTCTGTTCGAGGTCATTGCTGTAGGTTATGCTATTATGACAACAAGATCAATGGATATGGATTGGAAAATGAGGGCAGTTCGCGTTTTGCCAATGTTTCTTTTGCCTGCGCTGTCAACTGCTACATATTCAACATTTGTCAGCTTCACAAGGATGTGTGATCGCAAGGACCAGAAAATTCTTGAAAGGCTTAGAGCCGAAAGAAAAGCAAAAATTGATGAACTCAAAGAAAAGACAAATTATTACATTACTCAACAACTCATTCAGAGATATGACACGGATCCGGCAGCAAAAGCAGCCGCTGCAACTGTTTTAGCATCAAAGTTGGGTGCAGATTCTGGTTTGAACGTGTATGTGGGGGATGAATCTTCTGGTGCTCCAACAGGGAAGACCAAGGATGTTGAAGTTGTGCAGTCAGGTGGACTTCGAAATCGCAAACAAGTGAACTCTAAATCCACTACTCCAGGGACAAATACACCAAATTATTCTGATCAACAATTAGTTGGTGGTGGTTATGGGAAAATTGATCCAACTCAAACTCCTGAGCATAATAAGCTTGTAGTTGTTGAACATCATCCTCAAACTTCAACAATGAATGATGGAGGATGGATTGCTCGAATTGCAGCATTGCTTGTGGGTGAGGATCCAACGCAGTCTTATGCACTCATATGTGGTAATTGCCATATGCACAATGGTCTTTCTCGAAAGGAGGATTTCCCATTCATTACTTATTATTGCCCACATTGTCACGCCTTGAACAAACCAAAGCATTCGGATGAGAATATATCTGGTTTAAGTCTCCCAAACACTGGGTCTCCAAAAACGGATGATGGCGAAGAAGTTAAAAAAGTTGGTGCTTCTGCAGCTGACAGCTTAATTGGAAGCGATAGTCCTGTAAAAACTATCCCTGAGGTTGAGGAAATATCTGACCAGGCTATTTCAGGGGAAGAAAGCTAG 1212 0.4266 MGDEKGEKKETSVVNENIENNDEKTKKPNKKGFISRIWNAMFRSKRDDFEKRLQCITKEENAVVARMSTRSRTWRRTSRQLILFSVLFEVIAVGYAIMTTRSMDMDWKMRAVRVLPMFLLPALSTATYSTFVSFTRMCDRKDQKILERLRAERKAKIDELKEKTNYYITQQLIQRYDTDPAAKAAAATVLASKLGADSGLNVYVGDESSGAPTGKTKDVEVVQSGGLRNRKQVNSKSTTPGTNTPNYSDQQLVGGGYGKIDPTQTPEHNKLVVVEHHPQTSTMNDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLSRKEDFPFITYYCPHCHALNKPKHSDENISGLSLPNTGSPKTDDGEEVKKVGASAADSLIGSDSPVKTIPEVEEISDQAISGEES 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01643 403 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 30 360 IPR040115 GO:0071786
Spst8g01643 403 MobiDBLite consensus disorder prediction 227 251 - -
Spst8g01643 403 MobiDBLite consensus disorder prediction 342 403 - -
Spst8g01643 403 MobiDBLite consensus disorder prediction 1 29 - -
Spst8g01643 403 Coils Coil 143 166 - -
Spst8g01643 403 MobiDBLite consensus disorder prediction 344 358 - -
Spst8g01643 403 MobiDBLite consensus disorder prediction 207 264 - -
Spst8g01643 403 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 288 338 IPR019273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01643 Spst-Chr8 19101496 19106184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01643 K23292 - gmx:100815496 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01643 8 19101496 19106184 Spst9g00865 9 7593541 7596775 PCT