Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00839 ATGAACACTTCATTTTTGGAGATTAGGCTTGGTGCTTCTTTGGAAGGTAACAACACTACCAGAAGGGCTTTTCCCATAAGCAAGAGGTGCACTGTTTCTGTTATCAATGGTTGTTACCCAATGAGGCAAGCTTTTAGGTTTTGTGTACAAAATGTAGACTTGTTGAGGAAACACCATGTTTCCGCAAGGGGGTGTAGGTTTAAATGTTTCAAGGAAAAGGGACCATCCTTTTCTTTCAGTGTGAGTTATTTCACCCCATTGTCGAAGGAGGGGCTTCTTTTGATGAGGGCCTCTGTGTACACTGCTGTTATATCTGGTTTGTGTTTTTTGCTTTGGTTTGGAAGGAATAAAGCCAAGGGGTTCGTTGAAGCCAATATCTTGCCTTCTGTTTGTTCAATGATCAGTGAGTCTATTCAGCGTGATGTTTGCTTTGGCAAGGTTACAAAATTATCGCCATTGAGTGTGACATTGGAGTCATTTTCATTAGGGCCACATGAAGAGGAATTATCGTGTGGTGAGGCTCCCACTGTTAAGATTCGTTTTCGCCTTCTTGCGAGTCTGTGGAGGGGGAAGCTTGTGTTTGATGCAGTTTTGTCACATGCGTGTGTCATGGTGGTGCAGAAGAGGGACTATAGTTGGTTAGGGATACCAGTCTCTCAAGAGGGCATTCAGAAGCGATTGTCAACCGAAGAGGGACTTGATCATCGCACTCGGGTGAGGAGGGTTGCACGTGAGGAGGCCGCAGCAAAATATGCGAAAGAAAGGGATGATGCAGCCAGGGAAGCTTCAGAGATGGGTTACTTTGTTTCTGAGAAGAATTGTGGTCCATCCAAGGATAATGATGACTTAAGGGAGATTGCAACTCATTCAGCAGGAGGAACAGACTTCAAGGGGTTTTTCTGTATGAAGGAGGTGGAGCAGCATGGTCATCGTTGTGTGGACACAGGTGTTGATTATGATACGAAGCATGGTGATTTGGAGAAGGATTTTTTGGTGAAATTCCCTGGAAAAGGACTTAAGTTTTGGTCCAGAATCATTAAAGGGCATAAAAATCACAAGTGTAAACGGAAGGCTAAAAGGAGTGACATCAGTGCATCTGGTATTGCTCTTAGAAACAGAATTCTTGAACGTGGTGCATTTGCCGCAAATGCATATTTTCGCAGTCAATCATATGGGCAGTTTGAGCGGCCTTCATCATCTTCTAAAGACCATGATATGCAGTTGGTGAAAAGTGATGTTGACAAAAAAGCTGCATCTTTTATCCGTGCTGATGATAATAGAAACAGTGATAATCAGAATGATACGCAACTCAGAGGTCTGGGAATCTGGTCTCCTTCGGCAAATGAAAATACTGGTCATTCAAATGATTTAAAATTTTCCAGTGATCTTCCTTCAAAGACAAGGGAGAGTAAACATGGAAATTTACAATCTAGTGAAAAAATTGCAGAACATGGCAATGCAAATATTAGTACAGAGAAAGAGGAGGAGTTGGGACATCATGTTGCTCAAAGTCTAATTGATGGCTTTACTTCTTGTTTTAGAAACATTAAGGAATTGACATCTTTCTTCCTGTCTGGTCCCATTAAAAAGTTGAAGTCTGAAATGGGTCTGAAAGTTGAAGATATTGTTTCAGAAAATGTAGATGGGTTAAATGTTCTGCAGTCTGAAGGCTTTACTAAAAATTTTCCTGTTACATTTGATTCTGTTCATTTTAGAGGTGCAACTGTCATGCTACTTACATATGGTGACAGGGAAGTTAGGGTAATGGAGAATGTCAATGGCCATATGAAGTTTCATAACAACTACAACCGAATAAAGTTAAAACTGAGTGGAAATTGTAAGACTTGGAGATCAGATGATCTAAGTGAAGGTGATGGCTGGTTGTCTGTTGATGTTTTTGTTGACATTATTGAACAGAAATGGCATGCAAATTTGAAAATTAACCATTTTTTTGTCCCGCTGTTTGAAAGGATACTAGATATTCCAATTACATGGTCTAAAGGGAGGGCCAGTGGTGAGGTTCACTTGTGCATGTCAAAGGGTGAAGCTTTTCTAAATCTTCACGGGCAGCTTGACGTAACAGGGTTGAACTTCCAACTATCAAATGCTCCATCTTGTTTTTCTAACGCATCAGGAAGTTTATGTTTTCGTGGCCAAAGTATATTTTTACATAATGCAAGTGGCTGGTTTGGCAGCATTCCTCTTGACGCATCTGGAGAGTTTGGCATTCATCCTGAGGAAGGAGAATATCATCTTATGTGTCAGGTTCCTAGTGTTGAAGTGAATGCTCTGATGAGAACTTTCAATATGAGATCTCTCCTGTTTCCACGTGGTGCCACTCTAGCAGGATCAATGACTGCTCTATTTAATTGTCAAGGCCCACTGGATGCTCCTATTTTTGTGGGAACTGGAATGTTTTCTAGGATATTCTCTTCTTTTCATCTGGATGCTCCTAGAACTGAAGCATCTGAAGCACTTGGCAAAAGTAAAGAAGGTGGAGCATTAGCAGCATTTGATCGTATTGCTGATTTGTATGGAGTTAGGGCAAGTCTTGTAGATGGTGGTGAAATTCGAGGGGCTGGGACAGTATGGATATGCTCAGAGGCTGTGGATGACGAGACAGCAATAGATGCAAACTTCTCTGGAAGTTTGAACCTTGAAAAAATTATGCTTCGCTATATTCCCACTTATCATCATTTGATGCCACTCAAACTCGGAGTTTTAAATGAGAACACAAAACTTTCAGGATCTCTTATTAGACCGAGGTTTGATATAAAATGGACTGCACCGTCAGCAGAAGGGTCGTTTAGTGATGCTAGAGGAGATATCATAATCTCCGATGATTTCATCAGTACTAAATTTGCTTCAGCTGCATTTGTTTTGAATATGAAAGTTCAAACATCTTATTCTGATAATTTCCCTCTTAAAAGAGAAGGGTTTAATGCACCAAGAGCCCTTCCATTTACTGTTGGTGGAGTTGATTTTGATTTGCACGTGCATGGATTTGAATTCTTTAGTTTGGTTACTCCTTATACGTTGGATTTTCCAAGACCTTCGATTTTGAAAGCAACAGGAAGTTTCAAGTTTCAGGGAAAGGTAAAACCTAGTACCACTATTATTGAACAAAGTGATGAGAAGAACAAGAAGCATATGAATATGTTGGAGAAAGGAAGTGCAGATAGTCTTGTTGGTGAGGCTTCAATCTCTGGTCTCAAATTGAATGCCTATGGTGGGTCTGATGAAAGTCTTGTGGTGGATTTTGTTGGGCCACTACAGCTCAGTGGTAAAAGTGGTCTGAAAAGTGGACAATTGTTGTTTATTTCCCTTCATAAGGGGAAATTGATGGCTAATGTAGATTTTCGACCGTGTCATTCAGCTAGCTTAGAGGTATGGCATTTTCCACTTGATGAGCTGGAGCTTGCTTCTCTCAGGGGAACTATACAGAGGGCAGAAATCCAGCTTAATCTTCAAAAAAGGAGAGGACATGGAATGATATCTGTTCATCGGCCAAAATTCAGTGGGGTGCATGGTGAAGGACTGGATGTGGTAGCTAGGTGGAGTGGAGATGTTATCACGATTGAAAAAGCTATTTTGGAACAAAGCCACAGTCATTATGAAATGCAAGGTGAATATGTATTACCTGGTGCCCGAGACTGTAATCCTGTTGACACAAAAGGAGATGGCATTTTAGAAAGGTTCTTGTCTGAGCATGTTGGTAGTGTTATATCTTCGATGGGTAGGTGGAGAACGAAACTTGAAGTTCCCAGAGCTGATATTGCTGAGATGCTTCCCCTTGCAAGACTTCTATCTCGAAGTATGGATCCTGCTGTTCTCTCAAGATCAAAGGATTTTTTTATTCAAAGTTTACAGTCAACGGGATTATATTCTATGAGCACTCAAGAACTGCTTGAGGAGCTTCATGTTCCATCAAATAATGTTCTTGAGGATTTGAGCCTTCCTGGTTTACTTGAACTCAAAGGTTGTTGGCATGGTTCCCTCAATGCCAGTGGTGGAGGGAATGGAGACACCCTGGCAGAATTTGACTTTCACGGTGAGAATTGGGAGTGGGGAGAATACAGAACTCAGCGGGTCTCAGCAGTTGGTACTTATAGTAATGATGATGGTATACACCTGAAGAATTTTTTGGTTGAGAAGGATAATGCTACAATTCATGCTAATGGAACTTTATTAGGACCTAAAACCAACCTTCATTTTGCTGTCTTAAATTTTCCTGTTAGTTTGATACCGACATTAGTTCAGATCATCAACTCTACAGCAAAGAATGCTGTTCATTCTCTGCGGCAATTGTTAGCACCCATTAAGGGGATCTTGCATATGGAAGGAGATCTTAGAGGAAGTTTAGAAAAACCAGAATGTGATGCTCAAATTAGGCTCCTTAATGGTGCAATTGGTGGAATTGTTCTTGAACGAGCAGAAGTTGTTGCCTCTCTAACCCCAACTAGTCGTTTTCTATTCAATGCAAAATTTGAACCTTCGATCCAGAATGGTCATGTACTAATTCAAGGATCTATTCCTATTAATTTTTTTCAAAGTAAAATGTTACACCAAGATGTACAATTAGAAAAGAGTAGGGATACTTGGGTTCCTGAACGGATGAAAAAGAACATGGGGACCACAACCACTTATCATGCCAGGGACAAAAATGTTTCTTGGCATAGAAATGAAGGTTGGAATATTCAATTAGCAGAAAGGCTTAAAAGTTTGAATTGGCAAATTTTAGATGTTAGAGAAGTCAGGGTGGATGTTGATATAAAAGATGGGGGAATGATGCTGGTAACTGCTTCAACCCCTTATGCCAATTGGCTTCATGGCAAAGCTGATATCATGCTTGAGGCCAGAGGTACAGTTGATCAACCAGTACTTAATGGATATGCATCATTCCGTAGGGCATCTATATCTTCACCGGTTTTCCTAAATTCACTGACCAACTTTGGTGGAACTGTGCACATGAAATCAAACAGGTTATCCATCACCTCACTAGAGAGTAGGCTAGGCAGAAAAGGGAAGCTGCTTGTGAAAGGAAACCTTCCTCTCAGAACTAAGGAAACAGCCCTTGATGACAAGATCGAGTTTAAGTGTGAAGTTCTAGAAGTCAACTCCCAGGTGCAAATAACTGGTTCCATATTGCAACCTAACATTTCTGGAAATATTAAACTTAGTCATGGGGAAGTATATTTGTCGCATGATAAGGGTGATGCTTCTTCTAATAGATTCCCATCATATCGATCTGCACTTCCTGGTGGTGGCATTGATAAATCATTTGCTTCAAGATATATTTCGCAGTATGTTGGCTCAGAATCTGCTTCTCCGATGGCCAAAATTTCTCAAACTTCTGGCTCTGTCAACGAGTCAACTCAGGTGGAAAAGGATACGGAGGAAGTGCATACAAAACCAAATGTAGGAATCTGCCTTAGTGATTTGAAGCTTTTGCTTGGACCAGAGCTGAAGATAGTTTATCCTTTGATTCTTAATTTTGCCATTAGTGGAGAGCTTGAGTTGAATGGTCTTGCCCATCCCAAATGTATAAAGCCTAGGGGCAAACTCGTATTTGAGAATGGTGAAGTTGATCTAGTTGCAACACAGGTGAGGTTAAAACGGGAGCATCTCAATATTGCAAGGTTTGAACCTGATTATGGACTAGATCCAATGCTAGATTTAATTTTGGTTGGATCTGAGAGGCAATATAGAATTCACCGTCGAGCAAGCAATTGGCAGGACTTTGAAGAGGATACATTGTCACCAATTGAGGTTGCCAGAAGACTTGATAGTCGGTTAGCAGAATCCATGTTGGAAAGCAATGGTCAACCTGCCTTTGATAAACTTGCAACTGCTACTCTTGAGAAACTAATGCCACGAATAGAAGGGATGCGTGAGTTTGGCCAGGCTAGGTTGAAGTGGGTTTACGCCCCTAGGATTCCTAGTTTGGTTTCTGGTGCTACATTGGATCCTTTCACTTTACTTGCTCATAATTTAACATTTGGTACTGACATCGAAGTCCAGCTCGGGAAACGTATTCAGGCCAGAATCGTCAGGCAAATGAAGGAATCACAGATGGAAATGGAATGGACCTTGACCTATCAACTAAGAAATCGTTTGCATCTGTGCCTAAAGCACGGTTCATCGAAATGCTTACTTTTTGAATATTCTGCTACATTCCAGGATTAA 6186 0.4088 MNTSFLEIRLGASLEGNNTTRRAFPISKRCTVSVINGCYPMRQAFRFCVQNVDLLRKHHVSARGCRFKCFKEKGPSFSFSVSYFTPLSKEGLLLMRASVYTAVISGLCFLLWFGRNKAKGFVEANILPSVCSMISESIQRDVCFGKVTKLSPLSVTLESFSLGPHEEELSCGEAPTVKIRFRLLASLWRGKLVFDAVLSHACVMVVQKRDYSWLGIPVSQEGIQKRLSTEEGLDHRTRVRRVAREEAAAKYAKERDDAAREASEMGYFVSEKNCGPSKDNDDLREIATHSAGGTDFKGFFCMKEVEQHGHRCVDTGVDYDTKHGDLEKDFLVKFPGKGLKFWSRIIKGHKNHKCKRKAKRSDISASGIALRNRILERGAFAANAYFRSQSYGQFERPSSSSKDHDMQLVKSDVDKKAASFIRADDNRNSDNQNDTQLRGLGIWSPSANENTGHSNDLKFSSDLPSKTRESKHGNLQSSEKIAEHGNANISTEKEEELGHHVAQSLIDGFTSCFRNIKELTSFFLSGPIKKLKSEMGLKVEDIVSENVDGLNVLQSEGFTKNFPVTFDSVHFRGATVMLLTYGDREVRVMENVNGHMKFHNNYNRIKLKLSGNCKTWRSDDLSEGDGWLSVDVFVDIIEQKWHANLKINHFFVPLFERILDIPITWSKGRASGEVHLCMSKGEAFLNLHGQLDVTGLNFQLSNAPSCFSNASGSLCFRGQSIFLHNASGWFGSIPLDASGEFGIHPEEGEYHLMCQVPSVEVNALMRTFNMRSLLFPRGATLAGSMTALFNCQGPLDAPIFVGTGMFSRIFSSFHLDAPRTEASEALGKSKEGGALAAFDRIADLYGVRASLVDGGEIRGAGTVWICSEAVDDETAIDANFSGSLNLEKIMLRYIPTYHHLMPLKLGVLNENTKLSGSLIRPRFDIKWTAPSAEGSFSDARGDIIISDDFISTKFASAAFVLNMKVQTSYSDNFPLKREGFNAPRALPFTVGGVDFDLHVHGFEFFSLVTPYTLDFPRPSILKATGSFKFQGKVKPSTTIIEQSDEKNKKHMNMLEKGSADSLVGEASISGLKLNAYGGSDESLVVDFVGPLQLSGKSGLKSGQLLFISLHKGKLMANVDFRPCHSASLEVWHFPLDELELASLRGTIQRAEIQLNLQKRRGHGMISVHRPKFSGVHGEGLDVVARWSGDVITIEKAILEQSHSHYEMQGEYVLPGARDCNPVDTKGDGILERFLSEHVGSVISSMGRWRTKLEVPRADIAEMLPLARLLSRSMDPAVLSRSKDFFIQSLQSTGLYSMSTQELLEELHVPSNNVLEDLSLPGLLELKGCWHGSLNASGGGNGDTLAEFDFHGENWEWGEYRTQRVSAVGTYSNDDGIHLKNFLVEKDNATIHANGTLLGPKTNLHFAVLNFPVSLIPTLVQIINSTAKNAVHSLRQLLAPIKGILHMEGDLRGSLEKPECDAQIRLLNGAIGGIVLERAEVVASLTPTSRFLFNAKFEPSIQNGHVLIQGSIPINFFQSKMLHQDVQLEKSRDTWVPERMKKNMGTTTTYHARDKNVSWHRNEGWNIQLAERLKSLNWQILDVREVRVDVDIKDGGMMLVTASTPYANWLHGKADIMLEARGTVDQPVLNGYASFRRASISSPVFLNSLTNFGGTVHMKSNRLSITSLESRLGRKGKLLVKGNLPLRTKETALDDKIEFKCEVLEVNSQVQITGSILQPNISGNIKLSHGEVYLSHDKGDASSNRFPSYRSALPGGGIDKSFASRYISQYVGSESASPMAKISQTSGSVNESTQVEKDTEEVHTKPNVGICLSDLKLLLGPELKIVYPLILNFAISGELELNGLAHPKCIKPRGKLVFENGEVDLVATQVRLKREHLNIARFEPDYGLDPMLDLILVGSERQYRIHRRASNWQDFEEDTLSPIEVARRLDSRLAESMLESNGQPAFDKLATATLEKLMPRIEGMREFGQARLKWVYAPRIPSLVSGATLDPFTLLAHNLTFGTDIEVQLGKRIQARIVRQMKESQMEMEWTLTYQLRNRLHLCLKHGSSKCLLFEYSATFQD 2061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00839 2061 MobiDBLite consensus disorder prediction 432 461 - -
Spst9g00839 2061 MobiDBLite consensus disorder prediction 420 481 - -
Spst9g00839 2061 PANTHER EMBRYO DEFECTIVE 2410 71 2061 - -
Spst9g00839 2061 MobiDBLite consensus disorder prediction 1780 1799 - -
Spst9g00839 2061 MobiDBLite consensus disorder prediction 462 478 - -
Spst9g00839 2061 Pfam TamB, inner membrane protein subunit of TAM complex 1686 1899 IPR007452 GO:0005886|GO:0009306
Spst9g00839 2061 Coils Coil 1140 1160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00839 Spst-Chr9 7319915 7339982 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00839 - - gmx:100796955 3250.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00839 9 7319915 7339982 Spst9g00839 9 7319915 7339982 ECH
Spst8g01822 8 22051260 22057501 Spst9g00839 9 7319915 7339982 PCT