Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01822 ATGCCATCTCCGGTCTTCCTCGATATCATCTGTGTTCTCTATCTCCACCTTATGAATGTCTCTAATTTCGGAGATGAATTGATCAGTTTAGAAATGTATCTGACACTGACAAAAGTTACTGACAACTTTACGAACCAACTGTACAATAGGGCAATAAACAATACTCTCACACCAATGGTTGCTACAGCTTATTGCTGTCGCTGTCGCTGCCGCACTGCAGCCTTGCGAGCAAACCCCATCGCCGGCAGCAACTGTTTGCCACTGCGCATCATTCCTTCCGACGTTCCTCTTCAACAGTTTGGAATAGCTTCGTGTGATGCACATGCTGCCAATGAACATAGGTCACGCAACATGCCTCTATCCTCAATACGCAGAGAATTCGCAAGGAGAGTGGGTCACATACGAACCTTCTCTTCAAACCTCGAAATGAAAGACTTTTTAGGTTACCTGGATTCCCTAAAAAATTACGAGAAATCAGGAGTTCCGAGAGGTGCCGGCACCGAGTCCGATGAGGGTTTCGATCTTGGTAGAATGAGACGACTCATGGAGCGTTTCGGTAATCCTCACACCAAGTTCAAGGCTGTTCATATTGCTGGGACTAAGGGAAAGGGATCTACAGCTGCATATATATCTAATATTCTCAGGACGGAAGGAAGATCTGGCAATCCAGTGTCGGCAAAGTTGCTGAATGATCTCTTTCATAGGATGAAGGCAGAACTTGACCAGGCAATGCAAGAGGAAAATGGTTGCATAAGCCATTTTGAGGTTTTCACTACAATGGCATTTATCCTATTTGCCGATGAGAATGTTGACATTGCTGTTATTGAGGCTGGGTTGGGGGGTGCACGAGATGCAACAAATATCATATCCAGCTCCCAACTTGCTGCAGCAGTCATAACTACTGTAGGTGAAGAACATTTGGCAGCTCTTGGGGGTTCTTTGGAAACAATTGCAATGGCAAAGGCAGGAATCATAAAACAAGGCCGTCCAGTTAGGTGTTTCTCTCTATAG 1011 0.453 MPSPVFLDIICVLYLHLMNVSNFGDELISLEMYLTLTKVTDNFTNQLYNRAINNTLTPMVATAYCCRCRCRTAALRANPIAGSNCLPLRIIPSDVPLQQFGIASCDAHAANEHRSRNMPLSSIRREFARRVGHIRTFSSNLEMKDFLGYLDSLKNYEKSGVPRGAGTESDEGFDLGRMRRLMERFGNPHTKFKAVHIAGTKGKGSTAAYISNILRTEGRSGNPVSAKLLNDLFHRMKAELDQAMQEENGCISHFEVFTTMAFILFADENVDIAVIEAGLGGARDATNIISSSQLAAAVITTVGEEHLAALGGSLETIAMAKAGIIKQGRPVRCFSL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01822 336 Pfam Mur ligase middle domain 197 327 IPR013221 GO:0005524|GO:0009058|GO:0016881
Spst8g01822 336 PANTHER FOLYLPOLYGLUTAMATE SYNTHASE-RELATED 142 218 IPR001645 GO:0004326|GO:0005524|GO:0009396
Spst8g01822 336 Gene3D - 133 335 IPR036565 GO:0005524|GO:0009058
Spst8g01822 336 Coils Coil 226 246 - -
Spst8g01822 336 ProSitePatterns Folylpolyglutamate synthase signature 1. 195 218 IPR018109 GO:0004326|GO:0005524|GO:0009396
Spst8g01822 336 ProSitePatterns Folylpolyglutamate synthase signature 2. 274 289 IPR018109 GO:0004326|GO:0005524|GO:0009396
Spst8g01822 336 SUPERFAMILY MurD-like peptide ligases, catalytic domain 172 333 IPR036565 GO:0005524|GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01822 Spst-Chr8 22051260 22057501 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01822 K20457 - gmx:100816933 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01822 8 22051260 22057501 Spst9g00839 9 7319915 7339982 PCT