Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00831 ATGAATACTCTCTCAGAAGCCTACAAAACACACCCTCTGAAGCTTGGTGATATCATCCCCTTAGACTTTTCTTCATCACCGAGTTTACCCGATTCCCACGCATGGACCCAACCCAATGATGATGGTGATGAATTCTCATTCAGTGATCCTGCATCATCATCATCCATACCCATCATAGACCTCATGGATCCGAATGCCACCAAACTCATAGCCCTTGCATGTGAGAACTGGGGTGCCTTCCATTTGAAGAATCATGGCATACCCTTAGATGTTATTCAGGGTGTGGAAGAAGAGGTCCAACGCCTCTTCTCTCTCCCTTCTGAACAAAAAATGAAGGCTCTTAGATCCCCTACTGGTGCCACTGGATATGGCATAGCACGGATTGCACCTTTCTTCTCCAAGTGCATGTGGCACGAAGGATTCACCATCATCGGCTCTCCCTCTCACGATGCCAAAAAGATATGGCCTGATGATTATGCACGCTTTTGTGATAGAATGGAGAATTATGAGAAGCAAATGAGGATTATAGCGGAGCGACTAACAGAGATGGTGATGGAGTTGCTGGGGATTTCTGAGGAAAAAAGGAAGTGGGTTGGTGCAAGCGAGGCAAATGGAGCTCTTCAGTTGAATTTCAACCCAAGTTGTCCTGACCCGAACCGAGCCATGGGTTTGGCTCCTCACACTGACACTTCAATCTTCACAATCCTTCAAACTCCATCCACTGGTCTGCAAATCTTCAAGGAAGGAAAAGGGTGGATCCCTGTGAACCCTCACCCTGATGCTCTCATTGTTCACACAGGCGATTTCTTACACATCATATCCAATGCACGCTTCAGCTGCCCGGTTCACCGCGTGATGCTGAATGAGAAGAAACGTTACTCCGTGGCTTATTTCTACTCTCCACCCATGCATTATATGTTGTCTCCCTGCGTGAGTAGTGATCTTAACTCTGTTGCTCGTTTTCGTGACGTGACCGTGGAGGAGTATATTGGGATCAAGTCTCAGAAGTTTGCAGACTCACTGTCTTTCATCAGTACTTGA 1041 0.4688 MNTLSEAYKTHPLKLGDIIPLDFSSSPSLPDSHAWTQPNDDGDEFSFSDPASSSSIPIIDLMDPNATKLIALACENWGAFHLKNHGIPLDVIQGVEEEVQRLFSLPSEQKMKALRSPTGATGYGIARIAPFFSKCMWHEGFTIIGSPSHDAKKIWPDDYARFCDRMENYEKQMRIIAERLTEMVMELLGISEEKRKWVGASEANGALQLNFNPSCPDPNRAMGLAPHTDTSIFTILQTPSTGLQIFKEGKGWIPVNPHPDALIVHTGDFLHIISNARFSCPVHRVMLNEKKRYSVAYFYSPPMHYMLSPCVSSDLNSVARFRDVTVEEYIGIKSQKFADSLSFIST 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00831 346 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 56 329 - -
Spst9g00831 346 Gene3D - 21 331 IPR027443 -
Spst9g00831 346 MobiDBLite consensus disorder prediction 29 50 - -
Spst9g00831 346 Pfam 2OG-Fe(II) oxygenase superfamily 206 301 IPR044861 -
Spst9g00831 346 Coils Coil 166 186 - -
Spst9g00831 346 FunFam Gibberellin 3-beta-dioxygenase 1 17 332 - -
Spst9g00831 346 SUPERFAMILY Clavaminate synthase-like 20 337 - -
Spst9g00831 346 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 157 IPR026992 -
Spst9g00831 346 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 202 301 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00831 Spst-Chr9 7246368 7247942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00831 51 345 Glycosyltransferase AT5G59530 27.554 4.15e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00831 K04124 - gmx:100818754 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01602 8 18437604 18439652 Spst9g00831 9 7246368 7247942 PCT