Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01602 ATGGCCACTACTCTCTCTGAAGCCTATAGAGACCACCCTCTCCACCTTCATCAAATTATCCCCTTAGACTTTTCTTCACTCGGGACCTTACCTGATTCCCATGCATGGCCTAAAGATGATGGTGATGATGATCGTGATCATGGGAGTGGATCATGCATACCCATCATTGACCTCATGGATCCTAATGCCATGGAACTCATAGGCCTTGCTTGTGAGAAGTGGGGTGCTTTCCAATTGAAGAACCATGGCATACCCTTAAGTGTTATTGAAGAGGTTGAAGAAGAGGCAAAGAGGTTCTTTGCCCTTCCCGCCGACCGGAAATTGAAGGCCCTACGATCCACGGCAGGCGCCACCGGCTACGGCCGGGCACGGATATCACCATTCTTCCCCAAGCACATGTGGCATGAAGGATTCACCATCATGGGGTCTCCATGTGATGATGCCAAAAAGATTTGGCCTAATGACCATGCACGGTTTTGCAACAAAGTGGAGAATTACCAGAAGCAAATGAAGATGCTGGCAGAGAAGCTAACAGAGATGATATTGAGGTTGTTGGGGATTGGTGAGGAAGAAAAGGGGTGGATTGGTTCAAGCAACCTGTGTGAAGCTGTTCAGCTGAACTTCTACCCATGTTGCCCTGAGCCAAACCGAGCCATGGGTCTAGCCCCTCACACGGACACTTCCCTCTTAACAATCCTCCACCAAAGCCAAACCAATGGCCTCCAAATCTTCAAGGAGGGTGCAGGGTGGGTCCCTGTGCACCCTCACCCCAACACTCTTGTTGTTCACACTGGGGACATTCTTCACATCTTGTCCAACTCAAGGTTTCGCTGTGCACTGCATCGTGTCATGGTGAACAGTGCAAGGCAAAGATACTCTGTGGCTTATTTCTATGGCCCCCCTTTGGATTACGTACTTTCTCCATTCCTTCTTTCTTCCTTCCCTCGTTTTCGTTCTTTGTCTGTCAAAGAGTATGTTGGCATCAAGGCCAAGAACCTTGGGGAAGCATTGTCTTTGATCACTATCATTCAAAACTAA 1038 0.4865 MATTLSEAYRDHPLHLHQIIPLDFSSLGTLPDSHAWPKDDGDDDRDHGSGSCIPIIDLMDPNAMELIGLACEKWGAFQLKNHGIPLSVIEEVEEEAKRFFALPADRKLKALRSTAGATGYGRARISPFFPKHMWHEGFTIMGSPCDDAKKIWPNDHARFCNKVENYQKQMKMLAEKLTEMILRLLGIGEEEKGWIGSSNLCEAVQLNFYPCCPEPNRAMGLAPHTDTSLLTILHQSQTNGLQIFKEGAGWVPVHPHPNTLVVHTGDILHILSNSRFRCALHRVMVNSARQRYSVAYFYGPPLDYVLSPFLLSSFPRFRSLSVKEYVGIKAKNLGEALSLITIIQN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01602 345 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 153 IPR026992 -
Spst8g01602 345 Gene3D - 17 333 IPR027443 -
Spst8g01602 345 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 53 326 - -
Spst8g01602 345 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 197 300 IPR005123 -
Spst8g01602 345 Pfam 2OG-Fe(II) oxygenase superfamily 203 300 IPR044861 -
Spst8g01602 345 Coils Coil 163 183 - -
Spst8g01602 345 FunFam Gibberellin 3-beta-dioxygenase 1 18 328 - -
Spst8g01602 345 SUPERFAMILY Clavaminate synthase-like 17 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01602 Spst-Chr8 18437604 18439652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01602 37 325 Glycosyltransferase AT5G59530 29.808 4.62e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01602 K04124 - gmx:100780857 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01602 8 18437604 18439652 Spst9g00831 9 7246368 7247942 PCT
Spst9g00830 9 7239947 7241328 Spst8g01602 8 18437604 18439652 PCT