Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00786 ATGGATCCAAACAACCTTCTCCCAGCCAATGGACTTGAAGAGGTCCACCCAAACGGTGTTTATGGCAAATTGTCTAACTCTGGAAAGGACGGTATTGATTCAAACGTAGGCCCTGGTGTTACTAAAATTATCGAAACTGAAGCTCCAAATGGAATCTTTGAAAATTTCATCCAGTATGATAGCACTCCAGCTAATTACTCATCCAAGGCAGAAATCAAGGAAGAATCAAGTGATTATGTAGGTGTGAACAATGTCACCATTTCTAAGGAAGAGGAAGAAGAAATCATAGACCGTACAGAGCAATTCAAAGTAGGAAAAGGTCCTGTTAAGAATAAGAATGCAAAGTCACCAAGTCCCAGAAGTGTTCATGCAAGTTCAATTAAAAAGACCAAAGATGGAAAAGATGAAGAGGTAGCATCTACTGTTTCAAATGGTACTTTTGCTTCAGACTCTATCCCAAGACAGCAAATAAAAAATAGATCATTGAGTGACAAACAGGATGGACTATCCAAGCACCCTGGAAAGTCTAACGTGGCACCTTCTGAAGCATCAAAGGAGAAGTCCAGACCACGACTATCGAAGAAAGGGCCTCCTGATAATCTTAATCTTCAAGGAGAAGCAGAATCTTCTTCTCCTACTGCAGAAGATGCCAAACCTCGCAGGGTAGGGATGCTCCCAAATTATGGATTCAGTTTCAAGTGTGATGAGCGAGCTGAGAGAAGAAGAGAGTTCTACACTAAGCTTGAGGAAAAGATTCATGCAAAGGAAGTGGAGGAGAGTAACTTGCAAGCGAAAACCAAGGAGACCCAAGAAGCTGAGATTAAGATGCTTAGAAAAAGTCTGGGATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAACCTCCACCTCCCAGGGTGGAAGTTAAAAAGATGCCAACTACAAGAGCTAAATCTCCCAAGCTTGGTCGTAAGAAGAGTTCAACAATTTCAGAGTCAGAAGGAAACACTAGCAATAGTGCTCGACAAGGTCGATTAAGTCTGGATGAGAAAGTGTCTCAGACTAACCTCACAAAAGGAATTACTCCTGTTCATCTAAAGAAGCCACATCGAAAGTCTCTTCCTCCTCGACTGACTTCTGAAAAGACCAGTTCATCCAATTCGGCATCTGCACGGACCCCATCTAAGGCAATGAATGATGACAAAACCTCCTTATCAAGTGTAACAACTGAAGTTGCCACCTTATCCATTTTAACTGGGGAAGCGAAAGTTGAAATAGCTGCAGCCACTGAAGAGAGCAATGTCTTATTGGATGAGACAAGTGAAGCAAAATCACCTACTGTGAATGCTGATTTAGTCATTGAAGAGAAACCGCTACTCACCTTGGCACAAGAACCCCTAGTGGCAGAGCTCTAA 1395 0.4237 MDPNNLLPANGLEEVHPNGVYGKLSNSGKDGIDSNVGPGVTKIIETEAPNGIFENFIQYDSTPANYSSKAEIKEESSDYVGVNNVTISKEEEEEIIDRTEQFKVGKGPVKNKNAKSPSPRSVHASSIKKTKDGKDEEVASTVSNGTFASDSIPRQQIKNRSLSDKQDGLSKHPGKSNVAPSEASKEKSRPRLSKKGPPDNLNLQGEAESSSPTAEDAKPRRVGMLPNYGFSFKCDERAERRREFYTKLEEKIHAKEVEESNLQAKTKETQEAEIKMLRKSLGFKATPMPSFYQEPPPPRVEVKKMPTTRAKSPKLGRKKSSTISESEGNTSNSARQGRLSLDEKVSQTNLTKGITPVHLKKPHRKSLPPRLTSEKTSSSNSASARTPSKAMNDDKTSLSSVTTEVATLSILTGEAKVEIAAATEESNVLLDETSEAKSPTVNADLVIEEKPLLTLAQEPLVAEL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00786 464 Pfam Targeting protein for Xklp2 (TPX2) domain 230 301 IPR027329 -
Spst9g00786 464 PANTHER PROTEIN WVD2-LIKE 4 97 405 IPR044833 GO:0008017
Spst9g00786 464 MobiDBLite consensus disorder prediction 317 354 - -
Spst9g00786 464 MobiDBLite consensus disorder prediction 371 399 - -
Spst9g00786 464 Coils Coil 245 275 - -
Spst9g00786 464 MobiDBLite consensus disorder prediction 139 159 - -
Spst9g00786 464 MobiDBLite consensus disorder prediction 286 399 - -
Spst9g00786 464 MobiDBLite consensus disorder prediction 98 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00786 Spst-Chr9 6737228 6747060 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00786 - - gmx:100793597 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00786 9 6737228 6747060 Spst9g00786 9 6737228 6747060 ECH
Spst8g01545 8 16766639 16770382 Spst9g00786 9 6737228 6747060 PCT