Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01545 ATGGATCCAATTAACCTTTTACCTACTGATGGGGTTGAAGTGGTCCACCAAAATGGTGTCCATGATGAACCTTCAAACTCCGGGGAGGATGGCGGTGCTTCATATGACTTAGACCCCAATGTCACCGAAACTGCAGAAACTGGAGCTTCGAATGGGAATTTTGATAATTTCCATCAGTCTGATAGTGCTGCATTTGATAACTCATTTGTGGAAGAAATCAAAGAATCAAATGACAATAATGATGGAAATAACATGACCATTCCTAAGGAAGAGGAAGTGAAAATATCAGATAATGCAAAACAATCAAGAGCACCAAAGGTTCTTGTCAAGAATAAGAATGTAAAGGCTCCAAGTTCAAGTGGTGTTCATGCAAGTTCAATCAATAAGAGCAAAACTGGAAAAGATAAAGAAACATCCTCATCTGTTTCAAATGGTACATCAGCTTTGGACACTCGCCCAAAACAGTTTATTAAAAGCAGCAGCAGATCATTCAATGATCGGCAGATACAATTGTCTAAGCCCAAGGTAAACTCTATCGCTTTTTGGGTGCTAAGCTTTTCACTTCGTCTTTCCCAGCATTCTTTGAAGTCTGATGAAGCATCTTCTGAAGTATCAACGGAGAAGACAAAACCAAAATCATTGAGCAAAGGACCCGTTGTTAAAGATCAAGGAGAAGAAGAATATTCCTTAAATGCCAACAATGAAGATGCCAAACCTCAAAGGGTGGGGACACTTCCAAATTATGGATTCAGTTTTAAGTGTGGTGAACGAGCTGAGAGAAGAAAAGAGTTCTATAATAAGCTTGAGGAAAGGATTCAGGCAAAGGAGGTGGAGAAGAGTAACTTGCAAGCAAAAACCAAGGAGACCCAAGAAGCCGAGATTAAGATGCTTAGGAAGAGTCTCAATTTTAAAGCTACTCCAATGCCAAGTTTTTATCAGGAGCCTGCTCCTCCTAAGGTTGAGCTAAAGAAGATACCAACTACAAGGGCAAAATCTCCCAAGCTAGGTCGAAAGAAAACTTCAACTAATTCAGAGTCAGATGGAAACACTAGCAGCAGCTCAAGACTAGCTCGTTTAAGTCTGGATGAGAAAGTTTCAGAGAGTAACCCCAGTAAGGCACCTACTCCTGTTCTTCAAAAGAAGCCGTATCGAAGATCTCTTCCTTCTCGACTGGCTTCTGAAAGGAACAGTGTATCAAATTCAACAACTGCACTGACTTCATCCAAGGCTATCAAGGATGAAAAGTCTTCTGTATCTCGTGCTGCTAAAAAGGATACCAACTTATCCAATGCTACAGGAGAAGAGAAAACCAACACGATTGCAGGAAATGAGGAGAAGGGTAACTTGTCCAGTGAAACAGGTGATACTGTGCCTCTGAATGTGGTTCCTTCAGATAATAAGCCAAGTGAAGAAGACTCTCATGTGAATGGTGACATAGCAGTTGAAGGGAATCCTCAGCCCTCCTTGGTACAAGAACCTGTTGCTACCAAGCAATAG 1497 0.4122 MDPINLLPTDGVEVVHQNGVHDEPSNSGEDGGASYDLDPNVTETAETGASNGNFDNFHQSDSAAFDNSFVEEIKESNDNNDGNNMTIPKEEEVKISDNAKQSRAPKVLVKNKNVKAPSSSGVHASSINKSKTGKDKETSSSVSNGTSALDTRPKQFIKSSSRSFNDRQIQLSKPKVNSIAFWVLSFSLRLSQHSLKSDEASSEVSTEKTKPKSLSKGPVVKDQGEEEYSLNANNEDAKPQRVGTLPNYGFSFKCGERAERRKEFYNKLEERIQAKEVEKSNLQAKTKETQEAEIKMLRKSLNFKATPMPSFYQEPAPPKVELKKIPTTRAKSPKLGRKKTSTNSESDGNTSSSSRLARLSLDEKVSESNPSKAPTPVLQKKPYRRSLPSRLASERNSVSNSTTALTSSKAIKDEKSSVSRAAKKDTNLSNATGEEKTNTIAGNEEKGNLSSETGDTVPLNVVPSDNKPSEEDSHVNGDIAVEGNPQPSLVQEPVATKQ 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01545 498 Coils Coil 265 292 - -
Spst8g01545 498 MobiDBLite consensus disorder prediction 85 99 - -
Spst8g01545 498 Pfam Targeting protein for Xklp2 (TPX2) domain 250 321 IPR027329 -
Spst8g01545 498 MobiDBLite consensus disorder prediction 194 243 - -
Spst8g01545 498 PANTHER PROTEIN WVD2-LIKE 4 93 442 IPR044833 GO:0008017
Spst8g01545 498 MobiDBLite consensus disorder prediction 303 498 - -
Spst8g01545 498 MobiDBLite consensus disorder prediction 390 412 - -
Spst8g01545 498 MobiDBLite consensus disorder prediction 337 375 - -
Spst8g01545 498 MobiDBLite consensus disorder prediction 40 66 - -
Spst8g01545 498 MobiDBLite consensus disorder prediction 113 128 - -
Spst8g01545 498 MobiDBLite consensus disorder prediction 17 169 - -
Spst8g01545 498 MobiDBLite consensus disorder prediction 137 169 - -
Spst8g01545 498 MobiDBLite consensus disorder prediction 422 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01545 Spst-Chr8 16766639 16770382 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01545 - - gmx:100786958 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01545 8 16766639 16770382 Spst8g01545 8 16766639 16770382 ECH
Spst8g01545 8 16766639 16770382 Spst9g00786 9 6737228 6747060 PCT