Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00770 ATGGCTTCCCACAAACTCCTTCCCACCATTTTCCTCCTCTCTCTCATTTCTTACTCATCATTCACTCAGGCCAATTGCCCACCCACTCCAAAGCCCACTCCCACTCCGAAGCCCACACCTCCCACACCCAAACCCTCTCCGAAGGTCCCCTCACCACCGCAACCCTCTCCAAAGCCCACACCACCCACCCCAAAGCCCACACCACCCACCCCAAAGCCCACACCACCCACACCCAAACCCTCACCCAAGCCCTCACCCAAGCCTAGCTGCCCTCCTCCTTCACCTCCATCACCCAAAGGTTCCTGCCCCATAGACACCCTAAAGCTAGGTGTTTGTGCTAAGATCCTAGGACTTGTGAACATCATTGTTGGAACTCCTCCTTCCAGCGAATGTTGCGCTTTGATTAAAGACTTGGCGGATTTGGAAGCCGCACTTTGCCTTTGCACTGCCATTAAAGCCAATGTGCTCGGAATCAACTTGAACGTGCCTGTCACGATCACCGCGATCCTCAGTGCGTGTCAAAAAACTGTCCCTTCTGGCTTCCAATGCCCCTAG 555 0.5459 MASHKLLPTIFLLSLISYSSFTQANCPPTPKPTPTPKPTPPTPKPSPKVPSPPQPSPKPTPPTPKPTPPTPKPTPPTPKPSPKPSPKPSCPPPSPPSPKGSCPIDTLKLGVCAKILGLVNIIVGTPPSSECCALIKDLADLEAALCLCTAIKANVLGINLNVPVTITAILSACQKTVPSGFQCP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00770 184 Gene3D - 102 184 IPR036312 -
Spst9g00770 184 Pfam Hydrophobic seed protein 102 184 IPR027923 -
Spst9g00770 184 MobiDBLite consensus disorder prediction 22 99 - -
Spst9g00770 184 SMART aai_6 102 183 IPR016140 -
Spst9g00770 184 PRINTS Proline rich extensin signature 34 55 - -
Spst9g00770 184 PRINTS Proline rich extensin signature 55 71 - -
Spst9g00770 184 PRINTS Proline rich extensin signature 21 33 - -
Spst9g00770 184 PRINTS Proline rich extensin signature 72 89 - -
Spst9g00770 184 FunFam pEARLI1-like lipid transfer protein 1 100 184 - -
Spst9g00770 184 CDD HPS_like 104 183 IPR027923 -
Spst9g00770 184 MobiDBLite consensus disorder prediction 27 99 - -
Spst9g00770 184 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 104 184 IPR036312 -
Spst9g00770 184 PANTHER - 10 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00770 Spst-Chr9 6607229 6607783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00770 93 184 Acyl Lipid Metabolism Gene Families AT4G22490 39.362 1.65e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00770 - - gsj:114414965 158.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00770 9 6607229 6607783 Spst9g00770 9 6607229 6607783 ECH
Spst8g01538 8 16551623 16552114 Spst9g00770 9 6607229 6607783 PCT