Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01538 ATGCACATGATCAGGCCTCACAATTTGCCTTTAAATTGGTCCACCTCCTTTGTCTTTCCCATTGTGATTTACTCAGCACCAAAGCACACCGCCAAAGTGTTTTTCATTTGCAACCTTGCAATGGCTTCCAACAAGCTTATTGCCACCATCTTGGTGCTTTCTCTCCTTGCCTACTCAACATCCACTAATGCATGTGGCACATGCCATCCCAAGGCTTCTCCTCCTCCTCCATCAGGGAAGTGCCCTAAGGACACATTGAAGTTAGGGGTTTGTGCTGACATTCTTGGACTTGTTAATGTTGTTGTTGGCTCCCCTGTCTCTAGCAAGTGTTGTGCACTGCTTCAGGGTTTGGCTGATCTAGAGGCTGCACTTTGCCTATGCACTGCCATCAAGGCCAATGTGCTTGGAATCAACTTGAATGTGCCTATCACACTCAGTGTGCTACTCAGTGCATGCCAAAAAACTGTTCCTTCTGGCTTCCAATGTGCATAG 492 0.4715 MHMIRPHNLPLNWSTSFVFPIVIYSAPKHTAKVFFICNLAMASNKLIATILVLSLLAYSTSTNACGTCHPKASPPPPSGKCPKDTLKLGVCADILGLVNVVVGSPVSSKCCALLQGLADLEAALCLCTAIKANVLGINLNVPITLSVLLSACQKTVPSGFQCA 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01538 163 CDD HPS_like 79 162 IPR027923 -
Spst8g01538 163 Gene3D - 80 163 IPR036312 -
Spst8g01538 163 PANTHER - 45 162 - -
Spst8g01538 163 SMART aai_6 81 162 IPR016140 -
Spst8g01538 163 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 84 162 IPR036312 -
Spst8g01538 163 FunFam pEARLI1-like lipid transfer protein 1 79 163 - -
Spst8g01538 163 Pfam Hydrophobic seed protein 81 163 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01538 Spst-Chr8 16551623 16552114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01538 79 162 Acyl Lipid Metabolism Gene Families AT4G22490 36.905 6.90e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01538 - - gmx:100306307 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01538 8 16551623 16552114 Spst8g01538 8 16551623 16552114 ECH
Spst8g01538 8 16551623 16552114 Spst9g00770 9 6607229 6607783 PCT