Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00764 ATGATATTACGTTATTCATCTTTCACTCTTCTTTTACTGTGGTTTTGCAACAGCTCTTTCTTAGACGCTCTCAATGGTGGATTTAGTGTGGAAATAATCCACCGTGACTCATCAAAATCACCATTTTATCATTCCACACAAACCCAATTCCAAAGAGTTGCCAATGCTGTGCATCGTTCCATCAATCGTGCTAATAGTTTGAACCAACCTATTGTCTATCCAAACGCAGCCGAGGCCACAGTAACACCAGATCTAGGTGACTACCTCATGAGCTATTCAGTTGGAACCCCACCATTCCAACTTTATGGGATTGTTGACACAGGTAGTCACATAATTTGGTTGCAGTGTCAACCTTGTAAAACCTGTTACAAACAAACCACTCCTATGTTTGATCCTTCAAAATCCACAACCTACAGAATCCTCCCTTGTTCTTCTACTACATGTCAAAATATGACGAGTACCCCTTGTTCCTCTGATAAAGGGAAACATTGTGAATATACTATTAACTATGGTGATGGGTCACACTCACAAGGAGACCTTAGTGTGGAAACCCTAACTTTAGCCTCCACTAGTGGCTCTCCTATTCAGTTTCCTAGAAGTGTTATTGGATGTGGATACAACAATACTGTATCATTTGAAGGGAAAAGCTCTGGCATAGTTGGCCTAGGAGTTGGACCTGTGTCCCTTATATCTCAAATGGGTTCTTCCATAGGTGGAAAGTTTTCTTATTGTTTGGCTCCAATGTTTACACAATCTAATTCGCCTAGCAAACTCAATTTTGGAGATGTTGCTGTGGTTTCTGGAGATGGGACTGTTTCAACCCCAATGGTTTTACATGATCAACAAGTGTTTTACTTCCTAACATTGGAAGCATTCAGTGTGGGAAACAAAAGGGTAGAGTTTGGAAGCTCCTTGTCTGGATCTGGTGGAAAGGGAAATGTGATAATTGACTCTGGTACCACACTCACTCTCTTGCCAAATGATGTCTACTCTAAATTGGAATCAGCAGTAGCAGAAGCAATCAAAGTAGAGCGTGCTGAGGATCCAAGTAATCGATTAAAGCTATGCTACAAAACTACACTTGATAAACTAGATGCACCAGTAATTACTGCACATTTTAGTGGTGCAGATGTCAAGTTGAATGCTATGAATTCCTTTCTTCAAATGACCCACACGGTAGTATGCTTGGCTTTCAGCTCAAGTGGAAATCTTGTCATCTTTGGGAACTTGGCACAACAAAACCTCTTGGTTGGCTATGACCTCCAAGAAAAGAAAATTTCCTTTAAGCCCACGGATTGTACAAAGTTTGTTTTTGTGATGGGTTGGAGATACAACGCTGGCTTGTTCCTCATAGCCACCGTCGTTGTTATTTGGGTTACCTCCGCTGAAGTTACCCAGGATATTTTTACAGATTATAAGCAGCCATTTGCAGTGACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAATAGCATTCATTAAGGACTGGTTCTGTAACTTACTTAAATCCCGCTCCTCTAAAAGTGGTAAAAATGCAGAGTGCGTGGATGAGTTTTCTGTCAGTATTAGCTCTCCTCTCAAAACCAATGGAATGCAGAACAACTTTGAACTGGAACTGGGGAGTGTGATTCGAAAAGATAGTGATTTAGACCTTTCAACGCTTTCAGATGTAACGCCATTAGTAACTAAATATAATGATAATACTGATGTGCTAAAGGTGGAGAAAGAACTTACTGCGAAGGAAATTGCTGCTTATGGGTTTTACATTGCACCTATTTGGTTTATAACAGAGTATCTATCAAATGCTGCCCTTGCACGAACAAGTGTTGCAAGTACAACAGTATTATCATCAACTTCGGGACTTTTCACTCTTTTCATTGGTGCATTTATGGGTCAAGACACTTTAAATGTAGCAAAAGTAGTTGCTGTCTTAGTCAGCATGGCTGGGGTTGTTATGACAACAATGGGGAAAACTTGGGCTGCGGATGAATCTCAATTAAGTGATACCAATGGAAAGCACTCTTTGGTTGGCGATCTTTTTGGAATTCTCTCAGCTATATCATATGGCCTATTTACAGTTCTTCTTAAGAAATTTTCTGGTGAAGGAGAAAGGGTTGATGTCCAAAAGCTGTTTGGGTATATTGGATTGTTTACCCTAGTAGCACTCTGGTGGCTTGTCTGGCCATTGATGGCCTTAGGAATCGAACCCAAATTCACCATTCCCCACTCTGCTAAAGTGGACGAAGTGGTTATTGCAAATGGATTCATTGGAAGTGTACTTTCAGACTACTTTTGGGCACTTTGTGTTGTATGGACTACTCCCCTTGTGGCCACGTTGGGAATGTCACTCACCATTCCGCTTGCTATGGTGGCTGACATGGTAATTCATGGTCGGCATTATTCAGCAGTATACATTCTTGGCTCTGCTCAGGTATTTGCAGGCTTTGTAATAGCTAATCTTTCAGATCGGTTGACGAAGAAGTTGGGATTGTAG 2499 0.4106 MILRYSSFTLLLLWFCNSSFLDALNGGFSVEIIHRDSSKSPFYHSTQTQFQRVANAVHRSINRANSLNQPIVYPNAAEATVTPDLGDYLMSYSVGTPPFQLYGIVDTGSHIIWLQCQPCKTCYKQTTPMFDPSKSTTYRILPCSSTTCQNMTSTPCSSDKGKHCEYTINYGDGSHSQGDLSVETLTLASTSGSPIQFPRSVIGCGYNNTVSFEGKSSGIVGLGVGPVSLISQMGSSIGGKFSYCLAPMFTQSNSPSKLNFGDVAVVSGDGTVSTPMVLHDQQVFYFLTLEAFSVGNKRVEFGSSLSGSGGKGNVIIDSGTTLTLLPNDVYSKLESAVAEAIKVERAEDPSNRLKLCYKTTLDKLDAPVITAHFSGADVKLNAMNSFLQMTHTVVCLAFSSSGNLVIFGNLAQQNLLVGYDLQEKKISFKPTDCTKFVFVMGWRYNAGLFLIATVVVIWVTSAEVTQDIFTDYKQPFAVTYLGASLMVVYLPIAFIKDWFCNLLKSRSSKSGKNAECVDEFSVSISSPLKTNGMQNNFELELGSVIRKDSDLDLSTLSDVTPLVTKYNDNTDVLKVEKELTAKEIAAYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVVMTTMGKTWAADESQLSDTNGKHSLVGDLFGILSAISYGLFTVLLKKFSGEGERVDVQKLFGYIGLFTLVALWWLVWPLMALGIEPKFTIPHSAKVDEVVIANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAVYILGSAQVFAGFVIANLSDRLTKKLGL 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00764 832 CDD pepsin_A_like_plant 88 433 IPR034161 -
Spst9g00764 832 Gene3D Acid Proteases 261 439 IPR021109 -
Spst9g00764 832 SUPERFAMILY Multidrug resistance efflux transporter EmrE 580 659 - -
Spst9g00764 832 Pfam Xylanase inhibitor C-terminal 285 429 IPR032799 -
Spst9g00764 832 SUPERFAMILY Acid proteases 85 434 IPR021109 -
Spst9g00764 832 Pfam EamA-like transporter family 578 656 IPR000620 GO:0016020
Spst9g00764 832 FunFam Aspartic proteinase CDR1 263 436 - -
Spst9g00764 832 Gene3D Acid Proteases 63 260 IPR021109 -
Spst9g00764 832 ProSiteProfiles Peptidase family A1 domain profile. 88 429 IPR033121 -
Spst9g00764 832 SUPERFAMILY Multidrug resistance efflux transporter EmrE 718 826 - -
Spst9g00764 832 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 314 325 IPR001969 GO:0004190|GO:0006508
Spst9g00764 832 Pfam Xylanase inhibitor N-terminal 88 262 IPR032861 -
Spst9g00764 832 FunFam Probable aspartic protease At2g35615 69 261 - -
Spst9g00764 832 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 442 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00764 Spst-Chr9 6542636 6552248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00764 67 436 Miscellaneous Gene Families AT1G77480 26.131 1.10e-20 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00764 K15289 - gmx:100792013 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01537 8 16491569 16498506 Spst9g00764 9 6542636 6552248 PCT